Commits on Source (111)
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- .gitignore 0 additions, 1 deletion.gitignore
- .gitlab-ci.yml 40 additions, 11 deletions.gitlab-ci.yml
- .gitlab/merge_request_templates/merge_request.md 1 addition, 0 deletions.gitlab/merge_request_templates/merge_request.md
- CHANGELOG.md 19 additions, 3 deletionsCHANGELOG.md
- README.md 17 additions, 11 deletionsREADME.md
- astrocyte_pkg.yml 2 additions, 1 deletionastrocyte_pkg.yml
- docs/flowchart.pdf 0 additions, 0 deletionsdocs/flowchart.pdf
- docs/index.md 1 addition, 0 deletionsdocs/index.md
- docs/references.md 1 addition, 1 deletiondocs/references.md
- test_data/A_1.bedpe.gz 0 additions, 0 deletionstest_data/A_1.bedpe.gz
- test_data/B_1.bedpe.gz 0 additions, 0 deletionstest_data/B_1.bedpe.gz
- test_data/design_single_contol_SE.txt 3 additions, 0 deletionstest_data/design_single_contol_SE.txt
- test_data/fetch_test_data.sh 6 additions, 0 deletionstest_data/fetch_test_data.sh
- test_data/test_cross.qc 1 addition, 0 deletionstest_data/test_cross.qc
- workflow/conf/biohpc.config 1 addition, 0 deletionsworkflow/conf/biohpc.config
- workflow/main.nf 38 additions, 11 deletionsworkflow/main.nf
- workflow/nextflow.config 18 additions, 1 deletionworkflow/nextflow.config
- workflow/scripts/annotate_peaks.R 3 additions, 2 deletionsworkflow/scripts/annotate_peaks.R
- workflow/scripts/call_peaks_macs.py 14 additions, 2 deletionsworkflow/scripts/call_peaks_macs.py
- workflow/scripts/generate_versions.py 1 addition, 1 deletionworkflow/scripts/generate_versions.py
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test_data/A_1.bedpe.gz
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test_data/B_1.bedpe.gz
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test_data/design_single_contol_SE.txt
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test_data/test_cross.qc
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