Only get the pooled files.

c86c2e79 · Venkat Malladi · 08d9f08a · c86c2e79 · c86c2e79
Commit c86c2e79 authored Apr 17, 2020 by Venkat Malladi
Hide whitespace changes
Inline Side-by-side

Showing with 2 additions and 2 deletions

workflow/main.nf workflow/main.nf +1 -1

workflow/scripts/plot_profile.sh workflow/scripts/plot_profile.sh +1 -1

No files found.
--- a/workflow/main.nf
+++ b/workflow/main.nf
@@ -483,7 +483,7 @@ process plotProfile {

  input:

-  file ("*.pooled.fc_signal.bw") from bigwigs.collect()
+  file bigWigList from bigwigs.collect()

  output:


--- a/workflow/scripts/plot_profile.sh
+++ b/workflow/scripts/plot_profile.sh
@@ -84,7 +84,7 @@ run_main() {
      usage
  fi

-  bws=$(ls *.bw)
+  bws=$(ls *.pooled.fc_signal.bw)

  check_tools || exit 1