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chipseq_analysis
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BICF
Astrocyte
chipseq_analysis
Commits
082cc46d
Commit
082cc46d
authored
Apr 13, 2020
by
Venkat Malladi
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Merge branch '80-concurrent_issue' into ci-merge-test
parents
a1d4744c
0de688a6
Pipeline
#6515
passed with stages
in 1837 minutes and 24 seconds
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.gitlab-ci.yml
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082cc46d
variables
:
GIT_DEPTH
:
5
GIT_CLONE_PATH
:
$CI_BUILDS_DIR/$CI_RUNNER_SHORT_TOKEN/$CI_PROJECT_NAME/$CI_PIPELINE_ID/$CI_CONCURRENT_ID/$CI_JOB_ID/
before_script
:
-
module add python/3.6.1-2-anaconda
-
pip install --user pytest-pythonpath==0.7.1 pytest-cov==2.5.1
-
module load nextflow/0.31.0
-
ulimit -c unlimited
-
ln -s /project/shared/bicf_workflow_ref/workflow_testdata/chipseq/*fastq.gz test_data/
stages
:
...
...
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