Commit edf862a7 authored by Venkat Malladi's avatar Venkat Malladi
Browse files

Update to test with new astrocyte runner.

parent ab74722e
Pipeline #6292 passed with stages
in 1167 minutes and 19 seconds
......@@ -20,12 +20,10 @@ user_configuration:
astrocyte:
stage: astrocyte
script:
- module load astrocyte/0.1.0
- module load astrocyte/0.2.0
- module unload nextflow
- cd ..
- astrocyte_cli validate chipseq_analysis
artifacts:
expire_in: 2 days
single_end_mouse:
stage: single
......
......@@ -17,7 +17,7 @@ All notable changes to this project will be documented in this file.
- Fix python version for MultiQC report
- Fix xcor to get lowest non zero value above 50
- Fix references to display in Multiqc report
- Update astrocyte testing to 0.2.0
## [publish_1.0.6 ] - 2019-05-31
### Added
......
......@@ -8,7 +8,7 @@
[![Coverage Report](https://git.biohpc.swmed.edu/BICF/Astrocyte/chipseq_analysis/badges/master/coverage.svg)](https://git.biohpc.swmed.edu/BICF/Astrocyte/chipseq_analysis/commits/master)
[![Nextflow](https://img.shields.io/badge/nextflow-%E2%89%A50.24.0-brightgreen.svg
)](https://www.nextflow.io/)
[![Astrocyte](https://img.shields.io/badge/astrocyte-%E2%89%A50.1.0-blue.svg)](https://astrocyte-test.biohpc.swmed.edu/static/docs/index.html)
[![Astrocyte](https://img.shields.io/badge/astrocyte-%E2%89%A50.2.0-blue)](https://astrocyte-test.biohpc.swmed.edu/static/docs/index.html)
[![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.2648845.svg)](https://doi.org/10.5281/zenodo.2648845)
......
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