From edf862a77f1cbf3d1428abaafff18357257a31c5 Mon Sep 17 00:00:00 2001 From: Venkat Malladi <venkat.malladi@utsouthwestern.edu> Date: Thu, 19 Mar 2020 22:52:07 -0500 Subject: [PATCH] Update to test with new astrocyte runner. --- .gitlab-ci.yml | 4 +--- CHANGELOG.md | 2 +- README.md | 2 +- 3 files changed, 3 insertions(+), 5 deletions(-) diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml index 6782976..00f0c3e 100644 --- a/.gitlab-ci.yml +++ b/.gitlab-ci.yml @@ -20,12 +20,10 @@ user_configuration: astrocyte: stage: astrocyte script: - - module load astrocyte/0.1.0 + - module load astrocyte/0.2.0 - module unload nextflow - cd .. - astrocyte_cli validate chipseq_analysis - artifacts: - expire_in: 2 days single_end_mouse: stage: single diff --git a/CHANGELOG.md b/CHANGELOG.md index 5c08ab6..2cbe40b 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -17,7 +17,7 @@ All notable changes to this project will be documented in this file. - Fix python version for MultiQC report - Fix xcor to get lowest non zero value above 50 - Fix references to display in Multiqc report - +- Update astrocyte testing to 0.2.0 ## [publish_1.0.6 ] - 2019-05-31 ### Added diff --git a/README.md b/README.md index ec8e8c7..34451e7 100644 --- a/README.md +++ b/README.md @@ -8,7 +8,7 @@ [](https://git.biohpc.swmed.edu/BICF/Astrocyte/chipseq_analysis/commits/master) [](https://www.nextflow.io/) -[](https://astrocyte-test.biohpc.swmed.edu/static/docs/index.html) +[](https://astrocyte-test.biohpc.swmed.edu/static/docs/index.html) [](https://doi.org/10.5281/zenodo.2648845) -- GitLab