Commits · dbb856c42b21a1ecb2f4e92948fb653fa6aadf7c · BICF / Astrocyte / cellranger_count

Apr 14, 2020
- Fix detailed 3&4 kitVersion · 747e74bd
  Gervaise Henry authored 5 years ago
  
  747e74bd
Apr 13, 2020
- Revert to layered configs · 17fe1fd5
  Gervaise Henry authored 5 years ago
  
  17fe1fd5
- Replace pytest · 40116fcc
  Gervaise Henry authored 5 years ago
  
  40116fcc
- Remove explicit config and try replacing -bg with -q · 801b68ab
  Gervaise Henry authored 5 years ago
  
  801b68ab
- Compress profile configs · 85e6ed53
  Gervaise Henry authored 5 years ago
  
  85e6ed53
- Fix config call · 41071388
  Gervaise Henry authored 5 years ago
  
  41071388
- Add nexflow.config to ci run · 62642c4d
  Gervaise Henry authored 5 years ago
  
  62642c4d
- Remove pytests from CI · 2ebf343e
  Gervaise Henry authored 5 years ago
  
  2ebf343e
- Move pytest for simple ci test also · 13d1f485
  Gervaise Henry authored 5 years ago
  
  13d1f485
- Try put ci pytest inline with inegrations · 948cb171
  Gervaise Henry authored 5 years ago
  
  948cb171
- Change CI test to use new kitVersion · 5a377165
  Gervaise Henry authored 5 years ago
  
  5a377165
- Set default queue to 32GB and fix CI for new runner settings · 4e8b9e89
  Gervaise Henry authored 5 years ago
  
  4e8b9e89
Feb 21, 2020
- Use profiles in ci · b45c214e
  Gervaise Henry authored 5 years ago
  
  b45c214e
Oct 08, 2019
- Add Nextflow Tower to CI · d4074018
  Gervaise Henry authored 5 years ago
  
  d4074018
Aug 05, 2019
- Remove md changes from CI · b762db38
  Jeremy Mathews authored 5 years ago
  
  b762db38
Jul 31, 2019
- Update .gitlab-ci.yml · e3687c64
  Gervaise Henry authored 5 years ago
  
  e3687c64
- no CI on md files · 146aa596
  Jeremy Mathews authored 5 years ago
  
  146aa596
- Add artifacts to CI · b832df3d
  Jeremy Mathews authored 5 years ago
  
  b832df3d
- fix .gitlab-ci.yml · 32f55ff9
  Jeremy Mathews authored 5 years ago
  
  32f55ff9
- Add Cellranger v3.1.0 · d1f94a03
  Jeremy Mathews authored 5 years ago
  
  d1f94a03
Jul 23, 2019
- update runtime settings · 8db1aed8
  Jeremy Mathews authored 5 years ago
  
  8db1aed8
- Update .gitlab-ci.yml · 27285ae6
  Gervaise Henry authored 5 years ago
  
  27285ae6
- final versions · e4ef9f0e
  Jeremy Mathews authored 5 years ago
  
  e4ef9f0e
- change runtimes · c5d8c6b2
  Jeremy Mathews authored 5 years ago
  
  c5d8c6b2
- add new directories · e483e11a
  Jeremy Mathews authored 5 years ago
  
  e483e11a
- add detailed 3 · c1ab37d9
  Jeremy Mathews authored 5 years ago
  
  c1ab37d9
- Test simple 3 test with cellranger 3.0.2 · 4daaf239
  Gervaise Henry authored 5 years ago
  
  4daaf239
- Fix mkdir for 1k testdata · d0239152
  Gervaise Henry authored 5 years ago
  
  d0239152
- Run simple3 test (hv2s1) with 1k reads, and set simple1 test (h3s1) to auto chemistry · d72024dc
  Gervaise Henry authored 5 years ago
  
  d72024dc
- revert to no astrocyte · 98101e80
  Jeremy Mathews authored 5 years ago
  
  98101e80
- astrocyte true in simple3 · 8c76242b
  Jeremy Mathews authored 5 years ago
  
  8c76242b
- make valid yml file · dc2bdad6
  Jeremy Mathews authored 5 years ago
  
  dc2bdad6
- add simple and detailed tests · d2b80f76
  Jeremy Mathews authored 5 years ago
  
  d2b80f76
Jul 22, 2019
- Restructure pytests · c0e59b31
  Jeremy Mathews authored 5 years ago
  
  c0e59b31
- Add CI updates · 62e0726d
  Jeremy Mathews authored 5 years ago
  
  62e0726d
Apr 27, 2019
- Update .gitlab-ci.yml · 771a4f0b
  Gervaise Henry authored 6 years ago
  
  771a4f0b
- Update .gitlab-ci.yml · 8a82e474
  Gervaise Henry authored 6 years ago
  
  8a82e474
- Update .gitlab-ci.yml · 3952384b
  Gervaise Henry authored 6 years ago
  
  3952384b
- Force mkdir and ln in CI · a70eaaf3
  Gervaise Henry authored 6 years ago
  
  a70eaaf3
Mar 22, 2019
- Fix simple test mkdir · b9ad5121
  Gervaise Henry authored 6 years ago
  
  b9ad5121