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Commit 4daaf239 authored by Gervaise Henry's avatar Gervaise Henry :cowboy:
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Test simple 3 test with cellranger 3.0.2

parent d0239152
4 merge requests!53Develop,!51Resolve "Add pytest to CI",!50Resolve "Add pytest to CI",!49Resolve "Add pytest to CI"
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......@@ -77,7 +77,7 @@ simple_3:
except:
- master
script:
- nextflow run workflow/main.nf --fastq "$CI_PROJECT_DIR/test_data/hu.v2s1r1k/*.fastq.gz" --designFile "$CI_PROJECT_DIR/test_data/hu.v2s1r1k/design.csv" --genome 'GRCh38-1.2.0' --kitVersion 'two' --version '2.1.1'
- nextflow run workflow/main.nf --fastq "$CI_PROJECT_DIR/test_data/hu.v2s1r1k/*.fastq.gz" --designFile "$CI_PROJECT_DIR/test_data/hu.v2s1r1k/design.csv" --genome 'GRCh38-1.2.0' --kitVersion 'two' --version '3.0.2'
- pytest -m count211
artifacts:
name: "$CI_JOB_NAME"
......
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