diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml index 07fdf75a30204615f9c6c97893e1045c399342d6..79f962c698e974eca3af0ef798c9b031f9c417ca 100755 --- a/.gitlab-ci.yml +++ b/.gitlab-ci.yml @@ -77,7 +77,7 @@ simple_3: except: - master script: - - nextflow run workflow/main.nf --fastq "$CI_PROJECT_DIR/test_data/hu.v2s1r1k/*.fastq.gz" --designFile "$CI_PROJECT_DIR/test_data/hu.v2s1r1k/design.csv" --genome 'GRCh38-1.2.0' --kitVersion 'two' --version '2.1.1' + - nextflow run workflow/main.nf --fastq "$CI_PROJECT_DIR/test_data/hu.v2s1r1k/*.fastq.gz" --designFile "$CI_PROJECT_DIR/test_data/hu.v2s1r1k/design.csv" --genome 'GRCh38-1.2.0' --kitVersion 'two' --version '3.0.2' - pytest -m count211 artifacts: name: "$CI_JOB_NAME"