From 4daaf239a8ad0e575037300b98ebdb010df454ff Mon Sep 17 00:00:00 2001
From: "Gervaise H. Henry" <gervaise.henry@utsouthwestern.edu>
Date: Tue, 23 Jul 2019 10:50:25 -0500
Subject: [PATCH] Test simple 3 test with cellranger 3.0.2
---
.gitlab-ci.yml | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml
index 07fdf75..79f962c 100755
--- a/.gitlab-ci.yml
+++ b/.gitlab-ci.yml
@@ -77,7 +77,7 @@ simple_3:
except:
- master
script:
- - nextflow run workflow/main.nf --fastq "$CI_PROJECT_DIR/test_data/hu.v2s1r1k/*.fastq.gz" --designFile "$CI_PROJECT_DIR/test_data/hu.v2s1r1k/design.csv" --genome 'GRCh38-1.2.0' --kitVersion 'two' --version '2.1.1'
+ - nextflow run workflow/main.nf --fastq "$CI_PROJECT_DIR/test_data/hu.v2s1r1k/*.fastq.gz" --designFile "$CI_PROJECT_DIR/test_data/hu.v2s1r1k/design.csv" --genome 'GRCh38-1.2.0' --kitVersion 'two' --version '3.0.2'
- pytest -m count211
artifacts:
name: "$CI_JOB_NAME"
--
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