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Commit e483e11a authored by Jeremy Mathews's avatar Jeremy Mathews
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add new directories

parent c1ab37d9
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4 merge requests!53Develop,!51Resolve "Add pytest to CI",!50Resolve "Add pytest to CI",!49Resolve "Add pytest to CI"
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.gitlab-ci.yml
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......@@ -5,14 +5,14 @@ before_script:
- module load nextflow/0.31.1_Ignite
- mkdir test_data/hu.v3s1r500
- mkdir test_data/mu.v3s1r500
- mkdir test_data/hu.v2s1r500
- mkdir test_data/hu.v3s2r10k
- mkdir test_data/mu.v3s2r10k
- mkdir test_data/hu.v2s2r10k
- ln -sfn /project/shared/bicf_workflow_ref/workflow_testdata/cellranger/cellranger_count/hu.v3s1r500/* test_data/hu.v3s1r500/
- ln -sfn /project/shared/bicf_workflow_ref/workflow_testdata/cellranger/cellranger_count/mu.v3s1r500/* test_data/mu.v3s1r500/
- ln -sfn /project/shared/bicf_workflow_ref/workflow_testdata/cellranger/cellranger_count/hu.v2s1r500/* test_data/hu.v2s1r500/
- ln -sfn /project/shared/bicf_workflow_ref/workflow_testdata/cellranger/cellranger_count/hu.v3s2r10k/* test_data/hu.v3s2r10k/
- ln -sfn /project/shared/bicf_workflow_ref/workflow_testdata/cellranger/cellranger_count/mu.v3s2r10k/* test_data/mu.v3s2r10k/
- ln -sfn /project/shared/bicf_workflow_ref/workflow_testdata/cellranger/cellranger_count/hu.v2s2r10k/* test_data/hu.v2s2r10k/
stages:
- astrocyte
......
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