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Commit 8c76242b authored by Jeremy Mathews's avatar Jeremy Mathews
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astrocyte true in simple3

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4 merge requests!53Develop,!51Resolve "Add pytest to CI",!50Resolve "Add pytest to CI",!49Resolve "Add pytest to CI"
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......@@ -77,7 +77,7 @@ simple_3:
except:
- master
script:
- nextflow run workflow/main.nf --fastq "$CI_PROJECT_DIR/test_data/hu.v2s1r500/*.fastq.gz" --designFile "$CI_PROJECT_DIR/test_data/hu.v2s1r500/design.csv" --genome 'GRCh38-1.2.0' --kitVersion 'two' --version '2.1.1'
- nextflow run workflow/main.nf --fastq "$CI_PROJECT_DIR/test_data/hu.v2s1r500/*.fastq.gz" --designFile "$CI_PROJECT_DIR/test_data/hu.v2s1r500/design.csv" --genome 'GRCh38-1.2.0' --kitVersion 'two' --version '2.1.1' --astrocyte 'true'
- pytest -m count211
artifacts:
name: "$CI_JOB_NAME"
......
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