Commits · 55be39f55e93840751a4774cb900a849be841fb3 · GUDMAP_RBK / RNA-seq

Nov 30, 2020
- Finalize CI unit uploadInputBag · 55be39f5
  Gervaise Henry authored 4 years ago
  
  55be39f5
- Finalize CI unit uploadInputBag · b51830df
  Gervaise Henry authored 4 years ago
  
  b51830df
- Finalize CI unit uploadInputBag · 9c9b2296
  Gervaise Henry authored 4 years ago
  
  9c9b2296
- Finalize CI unit uploadInputBag · bdd506c7
  Gervaise Henry authored 4 years ago
  
  bdd506c7
- Finalize CI unit uploadInputBag · 08fa8dd8
  Gervaise Henry authored 4 years ago
  
  08fa8dd8
- Finalize CI unit uploadInputBag · 56cb3ac1
  Gervaise Henry authored 4 years ago
  
  56cb3ac1
- Finalize CI unit uploadInputBag · 754ddd7e
  Gervaise Henry authored 4 years ago
  
  754ddd7e
- Finalize CI unit uploadInputBag · 1acd021b
  Gervaise Henry authored 4 years ago
  
  1acd021b
- Finalize CI unit uploadInputBag · 0e90f16f
  Gervaise Henry authored 4 years ago
  
  0e90f16f
- Finalize CI unit uploadInputBag · 71933535
  Gervaise Henry authored 4 years ago
  
  71933535
- Finalize CI unit uploadInputBag · dbfd063c
  Gervaise Henry authored 4 years ago
  
  dbfd063c
- Finalize CI unit uploadInputBag · 9fa62f01
  Gervaise Henry authored 4 years ago
  
  9fa62f01
- Test CI unit uploadInputBag · c6fe0ba0
  Gervaise Henry authored 4 years ago
  
  c6fe0ba0
- Test CI unit uploadInputBag · cf071e88
  Gervaise Henry authored 4 years ago
  
  cf071e88
- Test CI unit uploadInputBag · e4198187
  Gervaise Henry authored 4 years ago
  
  e4198187
- Test CI unit uploadInputBag · e295de83
  Gervaise Henry authored 4 years ago
  
  e295de83
- Fix CI unit uploadInputBag · 9f33ee56
  Gervaise Henry authored 4 years ago
  
  9f33ee56
- Fix CI unit uploadInputBag · c8efb567
  Gervaise Henry authored 4 years ago
  
  c8efb567
- Fix CI unit uploadInputBag · 0f289056
  Gervaise Henry authored 4 years ago
  
  0f289056
- Fix CI unit uploadInputBag · 4495ee5b
  Gervaise Henry authored 4 years ago
  
  4495ee5b
- Fix CI unit uploadInputBag · 2255d5f8
  Gervaise Henry authored 4 years ago
  
  2255d5f8
- Change uploadInputBag unit test to use new singularity container · 33993f75
  Gervaise Henry authored 4 years ago
  
  33993f75
- Fix CI lint · 97195142
  Gervaise Henry authored 4 years ago
  
  97195142
- Start CI unit test for uploadInputBag · 7ae99ad5
  Gervaise Henry authored 4 years ago
  
  7ae99ad5
- Add uploadInputBag · eb83dee4
  Gervaise Henry authored 4 years ago
  
  eb83dee4
Nov 20, 2020
- Merge branch '68-outputBagDetails' into 'develop' · dcda53fd
  Gervaise Henry authored 4 years ago
```
Add run details to output bag

Closes #68

See merge request !51
```
  dcda53fd
- Add Jons Syntax Fix · a89eb9f5
  Jeremy Mathews authored 4 years ago
  
  a89eb9f5
Nov 19, 2020
- Change it all back · e605a9e7
  Jeremy Mathews authored 4 years ago
  
  e605a9e7
- Fix RID in singularity · 9b9245dc
  Jeremy Mathews authored 4 years ago
  
  9b9245dc
- Fixed RID · 331ce5b8
  Jeremy Mathews authored 4 years ago
  
  331ce5b8
- Gervaise made me do it again · 89af5024
  Jeremy Mathews authored 4 years ago
  
  89af5024
- Gervaise made me do it · e1bded43
  Jeremy Mathews authored 4 years ago
  
  e1bded43
- Add run details to output bag · f4e55f71
  Jeremy Mathews authored 4 years ago
  
  f4e55f71
- Merge branch '65-trim_galore' into 'develop' · 83d47884
  Gervaise Henry authored 4 years ago
```
Add back parallel trim step. Moved fastqc step after trim.

Closes #65

See merge request !50
```
  83d47884
Nov 14, 2020
- update dag. · 6728b926
  Venkat Malladi authored 4 years ago
  
  6728b926
Nov 13, 2020
- Spell correction. · 7e63c86b
  Venkat Malladi authored 4 years ago
  
  7e63c86b
- Update use of includeInputs. · ccfd2d00
  Venkat Malladi authored 4 years ago
  
  ccfd2d00
- Update changes to reflect only the change in order of steps. Fix output files. · c0a39ab8
  Venkat Malladi authored 4 years ago
  
  c0a39ab8
- Fix extra space. · ecf2f89e
  Venkat Malladi authored 4 years ago
  
  ecf2f89e
- Remove pigz parllel option. · baf8ba31
  Venkat Malladi authored 4 years ago
  
  baf8ba31