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Commit 4495ee5b authored by Gervaise Henry's avatar Gervaise Henry :cowboy:
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Fix CI unit uploadInputBag

parent 2255d5f8
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2 merge requests!58Develop,!53Resolve "process_derivaUpload"
Pipeline #8420 failed with stages
in 1 minute and 31 seconds
......@@ -290,7 +290,7 @@ uploadInputBag:
- hatrac=$(singularity run 'docker://gudmaprbk/deriva1.3:1.0.0' deriva-hatrac-cli --host dev.gudmap.org ls /hatrac/resources/rnaseq/pipeline/input_bag/ | grep -o TEST)
- >
if [ -z "${hatrac}" ]; then
singularity run 'docker://gudmaprbk/deriva1.3:1.0.0' deriva-hatrac-cli --host $dev.gudmap.org mkdir /hatrac/resources/rnaseq/pipeline/input_bag/TEST
singularity run 'docker://gudmaprbk/deriva1.3:1.0.0' deriva-hatrac-cli --host dev.gudmap.org mkdir /hatrac/resources/rnaseq/pipeline/input_bag/TEST
fi
- echo THIS IS A TEST FILE > test.txt
- md5=$(md5sum ./test.txt | awk '{ print $1 }')
......
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