Issues · GUDMAP_RBK / RNA-seq · GitLab

Remove hacky TIN report in MultiQC

#130 · created Jul 05, 2021 by Gervaise Henry v2.x.x To Do enhancement pipeline
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updated Jul 05, 2021
Check if alignData to depend on checkMetadata errors == false

#128 · created Jul 04, 2021 by Gervaise Henry v2.x.x To Do documentation pipeline
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updated Jul 15, 2021
Move uploadInputBag to occur right before uploadExecutionRun

#126 · created Apr 22, 2021 by Gervaise Henry v2.x.x To Do pipeline suggestion
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updated Jul 15, 2021
Some seqwho seq-type inferences have commas which mess up error descriptions

#124 · created Apr 20, 2021 by Gervaise Henry v2.x.x To Do bug pipeline
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updated Jul 15, 2021
Handle image caching in CI better

#123 · created Mar 05, 2021 by Gervaise Henry FUTURE Version CI/CD To Do
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updated Mar 05, 2021
Update $31 snippet to use bash opt-args

#117 · created Jan 30, 2021 by Gervaise Henry FUTURE Version To Do
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updated Mar 19, 2021
Update tracking db with on error

#94 · created Jan 11, 2021 by Gervaise Henry FUTURE Version To Do pipeline tracking
- 1
updated Jul 05, 2021
Add option for long lived globus-credential file

#93 · created Jan 11, 2021 by Gervaise Henry FUTURE Version To Do data-hub pipeline
- 1
updated Jul 05, 2021
On process fail retry

#66 · created Aug 14, 2020 by Gervaise Henry discussion
- 0
updated Apr 20, 2021
Add new GRCm39

#59 · created Jul 23, 2020 by Gervaise Henry FUTURE Version discussion enhancement
- 2
updated Apr 20, 2021
AWS/DNANeuxs Cost

#58 · created Jul 23, 2020 by Gervaise Henry FUTURE Version discussion
- 1
updated Feb 22, 2021
Possibly move params.source to config?

#55 · created Jul 15, 2020 by Gervaise Henry FUTURE Version discussion suggestion
- 2
updated Jul 05, 2021