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Commit b51830df authored by Gervaise Henry's avatar Gervaise Henry :cowboy:
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Finalize CI unit uploadInputBag

parent 9c9b2296
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2 merge requests!58Develop,!53Resolve "process_derivaUpload"
Pipeline #8438 failed with stages
in 1 minute and 32 seconds
......@@ -289,7 +289,7 @@ uploadInputBag:
- ln -sfn `readlink -e ./test_data/auth/credential.json` ./credential.json
- >
hatrac=$(singularity run 'docker://gudmaprbk/deriva1.3:1.0.0' deriva-hatrac-cli --host dev.gudmap.org ls /hatrac/resources/rnaseq/pipeline/input_bag/ | grep -o '/TEST$')
wait
echo wait &&
if [ -z "${hatrac}" ]; then
singularity run 'docker://gudmaprbk/deriva1.3:1.0.0' deriva-hatrac-cli --host dev.gudmap.org mkdir /hatrac/resources/rnaseq/pipeline/input_bag/TEST
echo /hatrac/resources/rnaseq/pipeline/input_bag/TEST created
......
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