GitLab

Parameter exploration job runner for the BioHPC nucleus cluster.

Testing for data normality and variability, reporting sample sizes, and visualizing data groups.

Data analysis pipeline for preprocessing and reconstruction of data acquired on the iThera MSOT InVision 256-TF imaging device.

An R program to visualize, normalize, and analyze -omics data such as those from microarray, metabolomics and proteomics experiments. Data are supplied as a list or table along with parameter settings, all in an Excel file.

Low-frequency small variants and large deletions detection from mitochondrial DNA deep sequencing experiments.

This project houses code from the Meeks Lab and TIBIR Whole Brain Microscopy Facility that facilitates image registration and analysis

DeBias decouples global bias from direct interactions in co-orientation and co-localization data.

Phillips replacement

De novo circular RNA detection from circular viral genome

Quick and dirty singularity bootstrap definitions for all biocontainers.

An example of ATAC-seq using BioHPC Astrocyte workflow engine.