GitLab

Know-how, trouble-shooting, work log, and memo, etc.

This is a set of python and R routines for converting imaging and mask information to radiomic features and perform simple classification task.

An example workflow package for the BioHPC Astrocyte workflow engine.

A vagrant box containing the setup necessary for building singularity images

Data analysis pipeline for preprocessing and reconstruction of data acquired on the iThera MSOT InVision 256-TF imaging device.

A skeleton repo acting as a host registry for various images used in Astrocyte.

An R program to visualize, normalize, and analyze -omics data such as those from microarray, metabolomics and proteomics experiments. Data are supplied as a list or table along with parameter settings, all in an Excel file.