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An R program to visualize, normalize, and analyze -omics data such as those from microarray, metabolomics and proteomics experiments. Data are supplied as a list or table along with parameter settings, all in an Excel file.

A host registry for various images used in Astrocyte

Testing for data normality and variability, reporting sample sizes, and visualizing data groups.

Journal Club for foundational machine learning topics

An introduction to singularity

An RNA-seq data analysis workflow.

A single-cell RNA-seq analysis workflow for data stored on the BioHPC using CellRanger and Seurat.

An example workflow package for the BioHPC Astrocyte workflow engine.

A general purpose Astrocyte workflow to run quality control on single cell RNA sequencing data.

BFei's student group project placenta segmentator

Files from the Advanced Concepts of Deep Learning Nanocourse

A vagrant box containing the setup necessary for building singularity images

This repo is designed to provide a set of scripts that models microbial communities using generalized Lotka-Volterra equations.