Commits · 5334a8911567befad8be80a2d6543e72e3632664 · GUDMAP_RBK / RNA-seq

Jul 22, 2021
- Change nodefaults param to set, instead of list · 5334a891
  Gervaise Henry authored 3 years ago
  
  5334a891
- Add nodefaults to all inserts calls with deriva.core · 8995bdbd
  Gervaise Henry authored 3 years ago
  
  8995bdbd
- Add license info to pR scripts · 8028c2d2
  Gervaise Henry authored 3 years ago
  
  8028c2d2
- Add license info to python scripts · 27d31ee7
  Gervaise Henry authored 3 years ago
  
  27d31ee7
Mar 30, 2021
- Move fastq count up and remove report from aws ci · 8a2f76ab
  Gervaise Henry authored 4 years ago
  
  8a2f76ab
Mar 21, 2021
- Fix staging error rep count · b6ec0946
  Gervaise Henry authored 4 years ago
  
  b6ec0946
Mar 20, 2021
- Fix the hub count badges · 6233f499
  Gervaise Henry authored 4 years ago
  
  6233f499
Mar 12, 2021
- Trim - from versions for badge creations · f8073da8
  Gervaise Henry authored 4 years ago
  
  v2.0.0rc02
  
  f8073da8
Mar 08, 2021
- Make dummy env badge dir if case of emergencies · 70563bcd
  Gervaise Henry authored 4 years ago
  
  70563bcd
- Fix - in not-tested · 6dc30eb9
  Gervaise Henry authored 4 years ago
  
  6dc30eb9
- Create untested badges for env if not tested · a3a43a5d
  Gervaise Henry authored 4 years ago
  
  a3a43a5d
Mar 04, 2021
- Fix nextflow.config reference for badges · 1d7acf24
  Gervaise Henry authored 4 years ago
  
  1d7acf24
Mar 03, 2021
- Fix versions · 6b685bca
  Gervaise Henry authored 4 years ago
  
  6b685bca
Mar 02, 2021
- Update link from version report to wiki · e10247c7
  Gervaise Henry authored 4 years ago
  
  e10247c7
- Add seqtk to references · 36caf093
  Gervaise Henry authored 4 years ago
  
  36caf093
Feb 23, 2021
- Replace species inference with seqwho · 634fd8a3
  Gervaise Henry authored 4 years ago
  
  634fd8a3
Feb 12, 2021
- Move fastq count before cp · 821a0f05
  Gervaise Henry authored 4 years ago
  
  821a0f05
- Change bdbag to use cookie locally · 785c4858
  Gervaise Henry authored 4 years ago
  
  785c4858
Feb 09, 2021
- Fix new badge labels · 1001286b
  Gervaise Henry authored 4 years ago
  
  1001286b
- Fix new badge labels · ce283ff1
  Gervaise Henry authored 4 years ago
  
  ce283ff1
Feb 08, 2021
- Change success/error badge labels · 45aec654
  Gervaise Henry authored 4 years ago
  
  45aec654
- Fix success · fba21bbf
  Gervaise Henry authored 4 years ago
  
  fba21bbf
- Make error count badges red · f3b4a3ae
  Gervaise Henry authored 4 years ago
  
  f3b4a3ae
- Add excapes · d11c1942
  Gervaise Henry authored 4 years ago
  
  d11c1942
- Fix servers · 9806f48c
  Gervaise Henry authored 4 years ago
  
  9806f48c
- Remove excape from ! · 4beb755a
  Gervaise Henry authored 4 years ago
  
  4beb755a
- Fix rep count · 0886a680
  Gervaise Henry authored 4 years ago
  
  0886a680
- Add new badges for execution run success/error · 8122db0a
  Gervaise Henry authored 4 years ago
  
  8122db0a
Jan 25, 2021
- Change logic for uploadOutputBag · a503d1e2
  Gervaise Henry authored 4 years ago
  
  a503d1e2
- Add blank mRNA_QC on data fail · f4e88555
  Gervaise Henry authored 4 years ago
  
  f4e88555
- Convert strandedness from yes/no to t/f · a19f61d1
  Gervaise Henry authored 4 years ago
  
  a19f61d1
- Convert strandedness from yes/no to t/f · b9798355
  Gervaise Henry authored 4 years ago
  
  b9798355
Jan 19, 2021
- Fix spike/species asignment for unexpected · 3b99da50
  Gervaise Henry authored 4 years ago
  
  3b99da50
- Fix python else syntac · 00b82094
  Gervaise Henry authored 4 years ago
  
  00b82094
- Further remove parsing restrictions from stranded/spike/species · 29e5ce6b
  Gervaise Henry authored 4 years ago
  
  29e5ce6b
- Remove ability to count fastqs manually from file.csv · f1d40472
  Gervaise Henry authored 4 years ago
  
  f1d40472
- Remove redundant check for multiple fastqs in parse metadata · 538a5074
  Gervaise Henry authored 4 years ago
  
  538a5074
- Allow .R[1,2] and _R[1,2] fastqs · 56d35250
  Gervaise Henry authored 4 years ago
  
  56d35250
- Only used fastq's named correctly · d78689ad
  Gervaise Henry authored 4 years ago
  
  d78689ad
- Allow unexpected values for stranded/spike/species · 8a91ad1b
  Gervaise Henry authored 4 years ago
  
  8a91ad1b