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Commit a3a43a5d authored by Gervaise Henry's avatar Gervaise Henry :cowboy:
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Create untested badges for env if not tested

parent 31ee1c24
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2 merge requests!76Develop,!75Env.ci
Pipeline #9505 passed with stages
in 50 minutes and 23 seconds
......@@ -34,6 +34,7 @@
* Don't download fastq's if fastq override present
* Override fastq count to override counts
* Change ambiguous species ci to wrong species
* Add test for DNAnexus env
*Known Bugs*
* Override params (inputBag, fastq, species) aren't checked for integrity
......
......@@ -50,4 +50,22 @@ curl --request GET https://img.shields.io/badge/R%20Version-${r_version}-bluevio
curl --request GET https://img.shields.io/badge/FastQC%20Version-${fastqc_version}-blueviolet?style=flat > ./badges/tools/fastqc.svg
curl --request GET https://img.shields.io/badge/SeqWho%20Version-${seqwho_version}-blueviolet?style=flat > ./badges/tools/seqwho.svg
curl --request GET https://img.shields.io/badge/RSeQC%20Version-${rseqc_version}-blueviolet?style=flat > ./badges/tools/rseqc.svg
curl --request GET https://img.shields.io/badge/MultiQC%20Version-${multiqc_version}-blueviolet?style=flat > ./badges/tools/multiqc.svg
\ No newline at end of file
curl --request GET https://img.shields.io/badge/MultiQC%20Version-${multiqc_version}-blueviolet?style=flat > ./badges/tools/multiqc.svg
echo "creating blank env badges if not tested"
if [ ! -f ./badges/env/dnanexus.svg ]
then
curl --request GET https://img.shields.io/badge/Envronment%3A%20DNAnexus-not%2Dtested-important?style=flat > ./badges/env/dnanexus.svg
fi
if [ ! -f ./badges/env/aws.svg ]
then
curl --request GET https://img.shields.io/badge/Envronment%3A%20AWS-not%2Dtested-important?style=flat > ./badges/env/aws.svg
fi
if [ ! -f ./badges/env/azure.svg ]
then
curl --request GET https://img.shields.io/badge/Envronment%3A%20Azure-not%2Dtested-important?style=flat > ./badges/env/azure.svg
fi
if [ ! -f ./badges/env/gcp.svg ]
then
curl --request GET https://img.shields.io/badge/Envronment%3A%20GCP-not%2Dtested-important?style=flat > ./badges/env/gcp.svg
fi
\ No newline at end of file
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