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Journal Club for foundational machine learning topics

BFei's student group project placenta segmentator

Files from the Advanced Concepts of Deep Learning Nanocourse

Anything that you think could be useful for the general processing of MR spectroscopy data. Intended to serve as a library for MRS processing. Currently basic utilities for MRS preprocessing and LCModel fitting have been uploaded

This is a set of python and R routines for converting imaging and mask information to radiomic features and perform simple classification task.

Simple Gears to help you start your own development at UT Southwestern

Notebooks and scripts provided here can be used for analyzing data files generated by Tecan and Biotek plate readers.

Generate flow-rate gradients with Fluigent microfluidic pumps.

TAD aware Regulatory Network Construction (TReNCo). The package provides scripts for constructing cell-type specific mouse TF-gene networks.

Three variants of regression models based on deep neural networks, random forest, and gradient boosting to predict chromatin interaction strength.

Course material for machine learning course offered to UTSW community.

Created by Cooper Mellema in Dr. Montillo's Deep Learning Lab University of Texas Southwestern Medical Center Lyda Hill Dept. of Bioinformatics Project centered around using different causal measures to infer Effective connectivity and DL properties