Commits · cc35440c31b415bb4ca8951b26a8a0d447a7215a · BICF / Astrocyte / rnaseq

Jun 11, 2019
- Merge branch '14-CI' into 'master' · cc35440c
  Brandi Cantarel authored 5 years ago
```
Resolve "Fix CI"

Closes #14

See merge request !6
```
  cc35440c
- fix CI yml · 2b7402e8
  Jeremy Mathews authored 5 years ago
  
  2b7402e8
- Fix CI · 5058b6cb
  Jeremy Mathews authored 5 years ago
  
  5058b6cb
May 30, 2019
- update dea.R round counts · 55b54dc6
  Brandi Cantarel authored 5 years ago
  
  publish_0.5.11
  
  55b54dc6
May 22, 2019
- Merge branch 'master' of git.biohpc.swmed.edu:BICF/Astrocyte/rnaseq · 870eff5e
  Brandi Cantarel authored 5 years ago
  
  publish_0.5.10
  
  870eff5e
- update starfusion and rnaseqalign.sh · 925c4582
  Brandi Cantarel authored 5 years ago
  
  925c4582
May 03, 2019
- Update .gitlab-ci.yml · 0e3599b7
  Brandi Cantarel authored 5 years ago
  
  0e3599b7
May 02, 2019
- adding new trinity · 88e1f22f
  Brandi Cantarel authored 5 years ago
  
  publish_0.5.9
  
  88e1f22f
- deleting dedundant code · 10a9e70c
  Brandi Cantarel authored 5 years ago
  
  publish_0.5.8
  
  10a9e70c
- Merge branch '8_documentation' into 'master' · d33d1b65
  Brandi Cantarel authored 5 years ago
```
documentation update on design file explanation

See merge request !5
```
  d33d1b65
Apr 26, 2019
- Merge branch '11-deafix_heatmap' into 'master' · 728e7bdd
  Venkat Malladi authored 5 years ago
```
updated submodules process_scripts

Closes #11

See merge request !4
```
  728e7bdd
Apr 19, 2019
- updated submodules process_scripts · f45dea2b
  Holly Ruess authored 5 years ago
  
  f45dea2b
Feb 12, 2019
- update skip dea · a1c370ff
  Brandi Cantarel authored 6 years ago
  
  publish_0.5.7
  
  a1c370ff
- added starfusion update · bb6e7948
  Brandi Cantarel authored 6 years ago
  
  bb6e7948
- added -d option stat anal · 6cb3c3c0
  Brandi Cantarel authored 6 years ago
  
  6cb3c3c0
Feb 07, 2019
- bg.rda -> *.rda · f42c462e
  Brandi Cantarel authored 6 years ago
  
  publish_0.5.6
  
  f42c462e
Feb 02, 2019
- update statanal into bash · d3570757
  Brandi Cantarel authored 6 years ago
  
  publish_0.5.5
  
  d3570757
Feb 01, 2019
- update shiny code, process scripts · 422f4fa1
  Brandi Cantarel authored 6 years ago
  
  publish_0.5.4
  
  422f4fa1
Jan 24, 2019
- Merge branch 'master' of git.biohpc.swmed.edu:BICF/Astrocyte/rnaseq · 5a4a99e9
  Brandi Cantarel authored 6 years ago
  
  5a4a99e9
- update fpkm · 34753c68
  Brandi Cantarel authored 6 years ago
  
  publish_0.5.3
  
  34753c68
Nov 19, 2018
- Merge branch 'shiny_update' into 'master' · 712d035d
  Brandi Cantarel authored 6 years ago
```
Shiny update

Closes #3

See merge request !1
```
  712d035d
- Merge branch 'master' into 'shiny_update' · 34bd6ead
  Brandi Cantarel authored 6 years ago
```
# Conflicts:
#   workflow/scripts/dea.R
```
  34bd6ead
Nov 12, 2018
- missing execute code · 568d7183
  Brandi Cantarel authored 6 years ago
  
  568d7183
Nov 09, 2018
- updating process scripts · 19ca68db
  Brandi Cantarel authored 6 years ago
  
  publish_0.5.2
  
  19ca68db
Sep 07, 2018
- process scripts · e550dccd
  Brandi Cantarel authored 6 years ago
  
  e550dccd
- 64 cpu max stringtie · 9d8cac39
  Brandi Cantarel authored 6 years ago
  
  9d8cac39
Jun 27, 2018

Merge branch 'dea.RFix' into 'master' · d97dfb21

Brandi Cantarel authored 6 years ago

Corrected issue where a gene with 0 read counts could crash the dea.R scripts.

See merge request !3

d97dfb21

Jun 25, 2018
- Corrected issue where a gene with 0 read counts could crash the dea.R scripts. · 18c034ed
  Jonathan Gesell authored 6 years ago
  
  18c034ed
Jun 20, 2018
- change footer width · d80812e4
  Danni Luo authored 6 years ago
  
  d80812e4
- fix cut pff dropdown menu · c7101bb3
  Danni Luo authored 6 years ago
  
  c7101bb3
May 31, 2018
- fix issue 3 comments · 7f6be42f
  Danni Luo authored 6 years ago
  
  7f6be42f
May 16, 2018
- update main · 2adff316
  Brandi Cantarel authored 6 years ago
  
  publish_0.5.1
  
  2adff316
- documentation update on design file explanation · 7123a15d
  Spencer Barnes authored 6 years ago
  
  7123a15d
May 08, 2018
- install shinythemes package · c8318607
  Danni Luo authored 6 years ago
  
  c8318607
May 03, 2018
- fix #3 · f35dbd24
  Danni Luo authored 6 years ago
  
  f35dbd24
May 02, 2018
- update shiny code in vizapp · 6c5b9379
  Danni Luo authored 6 years ago
  
  6c5b9379
Apr 18, 2018
- update rnaseqalign · 682cf459
  Brandi Cantarel authored 6 years ago
  
  2 tags
  
  682cf459
Apr 16, 2018
- update process_scripts · b60b1a75
  Brandi Cantarel authored 6 years ago
  
  2 tags
  
  b60b1a75
Apr 10, 2018
- adding support for umi · 21362dcc
  Brandi Cantarel authored 6 years ago
  
  publish_0.4.7
  
  21362dcc
Mar 26, 2018
- add support mouse · a25480f0
  Brandi Cantarel authored 6 years ago
  
  publish_0.4.6
  
  a25480f0