Shiny update

update shiny user interface, please check it here

changed the description

@s177373 Looking over the code I noticed a few issues:

1. Can you make the following images have a white background instead of a transparent background:

• DataSet QC -> MDS Analysis
• DataSet QC -> Sample Distances
• Dataset QC -> PCA Analysis
• Gene Alt Splicing -> 2nd figure

2. Can you make the following images white background instead of a grey background:

• Gene Compare (Both images)

3. Search on the 'Gene Alt Splicing' is not updated with new gene. Seems to be linked to the search for gene from 'Gene Compare' search area.

4. Radio button on 'DEA' is updates heatmap without user input of hitting the GO button.

assigned to @venkat.malladi

@s177373 I saw a few things as well:

1. On the DatasetQC tab, can you change "click it to load data" to "click to load data"?
2. On the DEA tab, sample comparisons under "Choose Pair" are often cut off in the dropdown menu. Some ideas for fixes could be:
   • Create a dropdown list for both "Group1" and "Group2".
   • Add a numbered table above the Differential Gene Set Comparison Tab with the various comparisons, and the dropdown menu on the left could have the corresponding numbers.
   • When the arrow in the dropdown menu is clicked, display the full character string

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• 7f6be42f - fix issue 3 comments

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• c7101bb3 - fix cut pff dropdown menu

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• d80812e4 - change footer width

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added 9 commits

• d80812e4...568d7183 - 8 commits from branch master
• 34bd6ead - Merge branch 'master' into 'shiny_update'

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mentioned in commit 712d035d

merged