Skip to content
GitLab
Projects
Groups
Snippets
Help
Loading...
Help
Help
Support
Community forum
Keyboard shortcuts
?
Submit feedback
Sign in
Toggle navigation
R
rnaseq
Project overview
Project overview
Details
Activity
Releases
Repository
Repository
Files
Commits
Branches
Tags
Contributors
Graph
Compare
Locked Files
Issues
9
Issues
9
List
Boards
Labels
Service Desk
Milestones
Iterations
Merge Requests
0
Merge Requests
0
Requirements
Requirements
List
CI / CD
CI / CD
Pipelines
Jobs
Schedules
Test Cases
Security & Compliance
Security & Compliance
Dependency List
License Compliance
Operations
Operations
Incidents
Environments
Packages & Registries
Packages & Registries
Container Registry
Analytics
Analytics
CI / CD
Code Review
Insights
Issue
Repository
Value Stream
Wiki
Wiki
Snippets
Snippets
Members
Members
Collapse sidebar
Close sidebar
Activity
Graph
Create a new issue
Jobs
Commits
Issue Boards
Open sidebar
BICF
Astrocyte
rnaseq
Commits
c8318607
Commit
c8318607
authored
May 08, 2018
by
Danni Luo
Browse files
Options
Browse Files
Download
Email Patches
Plain Diff
install shinythemes package
parent
f35dbd24
Pipeline
#1822
passed with stage
in 233 minutes and 47 seconds
Changes
2
Pipelines
1
Hide whitespace changes
Inline
Side-by-side
Showing
2 changed files
with
1 addition
and
1 deletion
+1
-1
vizapp/load_libs.R
vizapp/load_libs.R
+1
-0
vizapp/server.R
vizapp/server.R
+0
-1
No files found.
vizapp/load_libs.R
View file @
c8318607
...
...
@@ -3,6 +3,7 @@ update.packages()
install.packages
(
"sqldf"
,
dep
=
TRUE
)
install.packages
(
"gmp"
,
dep
=
TRUE
)
install.packages
(
"shinythemes"
,
dep
=
TRUE
)
install.packages
(
c
(
'gplots'
,
'lattice'
,
'latticeExtra'
,
'vegan'
,
'labdsv'
,
'cluster'
,
'ggplot2'
))
install.packages
(
"Vennerable"
,
repos
=
"http://R-Forge.R-project.org"
,
type
=
'source'
)
source
(
"http://bioconductor.org/biocLite.R"
)
...
...
vizapp/server.R
View file @
c8318607
...
...
@@ -11,7 +11,6 @@ library("gplots")
shinyServer
(
function
(
input
,
output
,
session
)
{
data.dir
<-
Sys.getenv
(
'outputDir'
)
#data.dir <-"workflow_322_output"
rda.dir
<-
data.dir
symsyn
<-
read.table
(
file
=
'symbol2synonym.txt'
,
header
=
FALSE
)
names
(
symsyn
)
<-
c
(
'symbol'
,
'synonyms'
)
...
...
Write
Preview
Markdown
is supported
0%
Try again
or
attach a new file
.
Attach a file
Cancel
You are about to add
0
people
to the discussion. Proceed with caution.
Finish editing this message first!
Cancel
Please
register
or
sign in
to comment