From c831860728c3ec290dbe82baa5542a56d3af029b Mon Sep 17 00:00:00 2001
From: Danni Luo <danni.luo@utsouthwestern.edu>
Date: Tue, 8 May 2018 10:06:21 -0500
Subject: [PATCH] install shinythemes package
---
vizapp/load_libs.R | 1 +
vizapp/server.R | 1 -
2 files changed, 1 insertion(+), 1 deletion(-)
diff --git a/vizapp/load_libs.R b/vizapp/load_libs.R
index ad44b42..268ae9d 100644
--- a/vizapp/load_libs.R
+++ b/vizapp/load_libs.R
@@ -3,6 +3,7 @@ update.packages()
install.packages("sqldf",dep=TRUE)
install.packages("gmp",dep=TRUE)
+install.packages("shinythemes",dep=TRUE)
install.packages(c('gplots','lattice','latticeExtra','vegan','labdsv','cluster','ggplot2'))
install.packages("Vennerable", repos="http://R-Forge.R-project.org",type='source')
source("http://bioconductor.org/biocLite.R")
diff --git a/vizapp/server.R b/vizapp/server.R
index fa90605..e0a38d7 100644
--- a/vizapp/server.R
+++ b/vizapp/server.R
@@ -11,7 +11,6 @@ library("gplots")
shinyServer(function(input, output, session) {
data.dir <- Sys.getenv('outputDir')
- #data.dir <-"workflow_322_output"
rda.dir <- data.dir
symsyn <- read.table(file='symbol2synonym.txt',header=FALSE)
names(symsyn) <- c('symbol','synonyms')
--
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