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BICF
Astrocyte
rnaseq
Commits
88e1f22f
Commit
88e1f22f
authored
May 02, 2019
by
Brandi Cantarel
Browse files
adding new trinity
parent
10a9e70c
Pipeline
#3792
failed with stage
in 0 seconds
Changes
1
Pipelines
2
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workflow/main.nf
View file @
88e1f22f
...
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@@ -104,7 +104,7 @@ process starfusion {
params.fusion == 'detect' && params.pairs == 'pe'
script:
"""
bash $baseDir/process_scripts/alignment/starfusion.sh -p ${pair_id} -r ${index_path} -a ${fq1} -b ${fq2}
bash $baseDir/process_scripts/alignment/starfusion.sh -p ${pair_id} -r ${index_path} -a ${fq1} -b ${fq2}
-m trinity -f
"""
}
...
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