Commit 9d8cac39 authored by Brandi Cantarel's avatar Brandi Cantarel

64 cpu max stringtie

parent 2adff316
Subproject commit 0bdf56d5bdb9252ce418fcf7d0c7bdbcee9ff4a1
Subproject commit 636e989b65cc76352111cedac9a8762fbe570384
......@@ -38,6 +38,7 @@ while (my $line = <DFILE>) {
my %hash;
foreach my $i (0..$#row) {
next unless ($newcols{$colnames[$i]});
$row[$i] =~ s/-//g unless ($colnames[$i] =~ m/Fq/);
$hash{$colnames[$i]} = $row[$i];
}
if ($hash{SampleID} =~ m/^\d/) {
......@@ -51,7 +52,7 @@ while (my $line = <DFILE>) {
$j = $lnct %% 2;
$hash{SampleGroup} = $grp[$j];
}
$hash{SampleGroup} =~ s/_/./g;
$hash{SampleGroup} =~ s/_//g;
my @line;
foreach $f (@cols) {
push @line, $hash{$f};
......
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