Commits · 76777f0c8a21c4ecb1c094b7fc86139c8faada41 · BICF / Astrocyte / chipseq_analysis

Apr 17, 2020
- Resolve merge on testing params. · 76777f0c
  Venkat Malladi authored 4 years ago
  
  76777f0c
Apr 16, 2020
- Merge branch 'ci-merge-test' into 'master' · df7ed9bf
  Gervaise Henry authored 4 years ago
```
Ci merge test

Closes #79 and #80

See merge request !68
```
  df7ed9bf
Apr 15, 2020
- Fix CI badges · 0d74d3f3
  Venkat Malladi authored 4 years ago
  
  0d74d3f3
- Update Pipeline status badge · 1e33da50
  Venkat Malladi authored 4 years ago
  
  1e33da50
Apr 13, 2020
- Merge branch '80-concurrent_issue' into ci-merge-test · 082cc46d
  Venkat Malladi authored 4 years ago
  
  082cc46d
- Remove the concurrent issue and moved to config file. · 0de688a6
  Venkat Malladi authored 4 years ago
  
  0de688a6
Mar 28, 2020
- Merge branch '80-concurrent_issue' into ci-merge-test · a1d4744c
  Venkat Malladi authored 4 years ago
  
  a1d4744c
- remove after script. · 24f3252e
  Venkat Malladi authored 4 years ago
  
  24f3252e
- Merge branch '80-concurrent_issue' into ci-merge-test · ad917147
  Venkat Malladi authored 4 years ago
  
  ad917147
- remove work directory. · fa258f22
  Venkat Malladi authored 4 years ago
  
  fa258f22
- Added in cleanup as well and new structure. · ba0e0850
  Venkat Malladi authored 4 years ago
  
  ba0e0850
- Merge branch '79-sigbus_error' into ci-merge-test · d7f31c15
  Venkat Malladi authored 4 years ago
  
  d7f31c15
- Update with pipelineid. · 96ed1fb4
  Venkat Malladi authored 4 years ago
  
  96ed1fb4
- Add the id of the persont hat created the job. · bac9290e
  Venkat Malladi authored 4 years ago
  
  bac9290e
- Add back runner id. · a7d13749
  Venkat Malladi authored 4 years ago
  
  a7d13749
- Update concurrent path. · b95a06ea
  Venkat Malladi authored 4 years ago
  
  b95a06ea
- Add Nextflow opts. · 92ea443a
  Venkat Malladi authored 4 years ago
  
  92ea443a
Mar 27, 2020
- Very complicated output path · fad31e6d
  Venkat Malladi authored 4 years ago
  
  fad31e6d
- More complicated clonepath · ff5f75ec
  Venkat Malladi authored 4 years ago
  
  ff5f75ec
- Change location of clone path · 17f213f8
  Venkat Malladi authored 4 years ago
  
  17f213f8
- Remove custom build directory · d97adbd0
  Venkat Malladi authored 4 years ago
  
  d97adbd0
- Add in git clone path · f7bc7453
  Venkat Malladi authored 4 years ago
  
  f7bc7453
- Update .gitlab-ci.yml · a88e90a5
  Venkat Malladi authored 4 years ago
  
  a88e90a5
- Update .gitlab-ci.yml · 41f160d9
  Venkat Malladi authored 4 years ago
  
  41f160d9
Mar 26, 2020
- Update .gitlab-ci.yml · 43dfad81
  Venkat Malladi authored 4 years ago
  
  43dfad81
Mar 25, 2020
- Update testing for paried-end. · 7bfeb98a
  Venkat Malladi authored 4 years ago
  
  7bfeb98a
Mar 24, 2020
- Merge branch '73-single_pool' into 'master' · e09a8b62
  Holly Ruess authored 4 years ago
```
Resolve "Single Rep Pool and Pseudo"

Closes #73

See merge request !63
```
  e09a8b62
Mar 21, 2020
- Merge branch '77-upgrade_astrocyte' into 'master' · 14d69096
  Spencer Barnes authored 4 years ago
```
Update to test with new astrocyte runner.

Closes #77

See merge request !66
```
  14d69096
Mar 19, 2020
- Update to test with new astrocyte runner. · edf862a7
  Venkat Malladi authored 4 years ago
  
  edf862a7
Mar 16, 2020
- Update flag · 21a78fc3
  Venkat Malladi authored 5 years ago
  
  21a78fc3
Mar 15, 2020
- Change options for ulimit · d7b3270d
  Venkat Malladi authored 5 years ago
  
  d7b3270d
- Merge branch '73-single_pool' of... · abcbdb32
  Venkat Malladi authored 5 years ago
```
Merge branch '73-single_pool' of git.biohpc.swmed.edu:BICF/Astrocyte/chipseq_analysis into 73-single_pool
```
  abcbdb32
- Clear java core dumps. · 3b0aeaf6
  Venkat Malladi authored 5 years ago
  
  3b0aeaf6
- Merge branch 'master' into '73-single_pool' · 5ce018b0
  Venkat Malladi authored 5 years ago
```
# Conflicts:
#   CHANGELOG.md

Consolidate Changelog
```
  5ce018b0
Mar 02, 2020
- Add before script. · 1a300201
  Venkat Malladi authored 5 years ago
  
  1a300201
- Merge branch '67-python_version' into 'master' · ab74722e
  Venkat Malladi authored 5 years ago
```
Resolve "Python Version not in Software Version"

Closes #67

See merge request !64
```
  ab74722e
Mar 01, 2020
- Update to pool. · fa0a8c48
  Venkat Malladi authored 5 years ago
  
  fa0a8c48
- Merge branch 'master' into '67-python_version' · 43c744a2
  Venkat Malladi authored 5 years ago
```
# Conflicts:
#   CHANGELOG.md
```
  43c744a2
Feb 29, 2020
- Merge branch '26-negative-fraglength' into 'master' · ad77c7b5
  Spencer Barnes authored 5 years ago
```
Resolve "callPeaksMACS exits when data is bad"

Closes #26

See merge request !62
```
  ad77c7b5
- Update testing to check 0 value. · e8746395
  Venkat Malladi authored 5 years ago
  
  e8746395