Commits · da9f10207dd6c985ab25eec33f1729ff1b8c7767 · GUDMAP_RBK / RNA-seq

Jul 22, 2021
- Change the way nodefaults is done · 04a136a7
  Gervaise Henry authored 3 years ago
  
  04a136a7
- Change nodefaults param to set, instead of list · 5334a891
  Gervaise Henry authored 3 years ago
  
  5334a891
- Add license info to pytest scripts · b4f56e92
  Gervaise Henry authored 3 years ago
  
  b4f56e92
- Add nodefaults to all inserts calls with deriva.core · 8995bdbd
  Gervaise Henry authored 3 years ago
  
  8995bdbd
- Add license info to pR scripts · 8028c2d2
  Gervaise Henry authored 3 years ago
  
  8028c2d2
- Add license info to python scripts · 27d31ee7
  Gervaise Henry authored 3 years ago
  
  27d31ee7
Jul 16, 2021
- Changed the spelling of inferred. · 21a1b44a
  Venkat Malladi authored 3 years ago
  
  21a1b44a
Mar 30, 2021
- Move fastq count up and remove report from aws ci · 8a2f76ab
  Gervaise Henry authored 4 years ago
  
  8a2f76ab
Mar 21, 2021
- Fix staging error rep count · b6ec0946
  Gervaise Henry authored 4 years ago
  
  b6ec0946
Mar 20, 2021
- Fix the hub count badges · 6233f499
  Gervaise Henry authored 4 years ago
  
  6233f499
Mar 12, 2021
- Trim - from versions for badge creations · f8073da8
  Gervaise Henry authored 4 years ago
  
  v2.0.0rc02
  
  f8073da8
Mar 08, 2021
- Make dummy env badge dir if case of emergencies · 70563bcd
  Gervaise Henry authored 4 years ago
  
  70563bcd
- Fix - in not-tested · 6dc30eb9
  Gervaise Henry authored 4 years ago
  
  6dc30eb9
- Create untested badges for env if not tested · a3a43a5d
  Gervaise Henry authored 4 years ago
  
  a3a43a5d
Mar 04, 2021
- Fix nextflow.config reference for badges · 1d7acf24
  Gervaise Henry authored 4 years ago
  
  1d7acf24
Mar 03, 2021
- Fix versions · 6b685bca
  Gervaise Henry authored 4 years ago
  
  6b685bca
Mar 02, 2021
- Update link from version report to wiki · e10247c7
  Gervaise Henry authored 4 years ago
  
  e10247c7
- Fix multiqc · 79adbc3a
  Gervaise Henry authored 4 years ago
  
  79adbc3a
- Fix tabing in multiqc config · 25a58702
  Gervaise Henry authored 4 years ago
  
  25a58702
- Add seqtk to references · 36caf093
  Gervaise Henry authored 4 years ago
  
  36caf093
- Fix seqwho tsv output for multiqc · 8f50b748
  Gervaise Henry authored 4 years ago
  
  8f50b748
- Add seqwho infer QC table to multiqc · d1271604
  Gervaise Henry authored 4 years ago
  
  d1271604
Feb 28, 2021
- Add quotes to seqwho error · eec5b4c5
  Gervaise Henry authored 4 years ago
  
  eec5b4c5
Feb 24, 2021
- Move nf and confs to match nextflow format · f8eeebc2
  Gervaise Henry authored 4 years ago
  
  f8eeebc2
Feb 23, 2021
- Replace species inference with seqwho · 634fd8a3
  Gervaise Henry authored 4 years ago
  
  634fd8a3
Feb 19, 2021
- Move non nextflow configs back to workflow and symlink files · 4bd19e37
  Gervaise Henry authored 4 years ago
  
  4bd19e37
- Utilize seq type inference from seqwho · 3c5f30fb
  Gervaise Henry authored 4 years ago
  
  3c5f30fb
Feb 12, 2021
- Move fastq count before cp · 821a0f05
  Gervaise Henry authored 4 years ago
  
  821a0f05
- Change bdbag to use cookie locally · 785c4858
  Gervaise Henry authored 4 years ago
  
  785c4858
Feb 11, 2021
- Nextflow-ify · 0a4b00a6
  Gervaise Henry authored 4 years ago
  
  0a4b00a6
Feb 10, 2021
- Add local configs · 76775df8
  Gervaise Henry authored 4 years ago
  
  76775df8
- Fix datahub ref download · 9d37cf2a
  Gervaise Henry authored 4 years ago
  
  9d37cf2a
Feb 09, 2021
- Add dnanexus configs · ec4e0c7e
  Gervaise Henry authored 4 years ago
  
  ec4e0c7e
- Start implementing seqwho · 34803354
  Gervaise Henry authored 4 years ago
  
  34803354
- Fix new badge labels · 1001286b
  Gervaise Henry authored 4 years ago
  
  1001286b
- Fix new badge labels · ce283ff1
  Gervaise Henry authored 4 years ago
  
  ce283ff1
Feb 08, 2021
- Change success/error badge labels · 45aec654
  Gervaise Henry authored 4 years ago
  
  45aec654
- Fix success · fba21bbf
  Gervaise Henry authored 4 years ago
  
  fba21bbf
- Make error count badges red · f3b4a3ae
  Gervaise Henry authored 4 years ago
  
  f3b4a3ae
- Add excapes · d11c1942
  Gervaise Henry authored 4 years ago
  
  d11c1942