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A general purpose Astrocyte workflow to run quality control on single cell RNA sequencing data.

This project is the astrocyte project to do variant analysis with BAMs generated in the RNASeq Differential expression analysis pipeline.

This project is the astrocyte project to do variant analysis with BAMs generated in the RNASeq Differential expression analysis pipeline.

This is the conversion of the BICF RNASeq pipeline into the nextflow framework.

An example of ATAC-seq using BioHPC Astrocyte workflow engine.

The runner for cutandrun

cutandrun pipeline from https://github.com/nf-core/cutandrun