scRNA-QC

A general purpose Astrocyte workflow to run quality control on single cell RNA sequencing data.

authored

Name	Last commit	Last update
workflow/scripts/annotate_peaks.R
workflow/scripts/call_peaks_macs.py
workflow/scripts/check_design.py
workflow/scripts/convert_reads.py
workflow/scripts/diff_peaks.R
workflow/scripts/experiment_design.py
workflow/scripts/experiment_qc.py
workflow/scripts/generate_references.py
workflow/scripts/generate_versions.py
workflow/scripts/map_qc.py
workflow/scripts/map_reads.py
workflow/scripts/motif_search.py
workflow/scripts/overlap_peaks.py
workflow/scripts/plotProfile.sh
workflow/scripts/pool_and_psuedoreplicate.py
workflow/scripts/trim_reads.py
workflow/scripts/utils.py
workflow/scripts/xcor.py