Explore projects
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Lauren McCormick / simulate-MT-44
GNU Affero General Public License v3.0Source codes to perform simulations of microtubule growth. Cleary et al. 2022, Elife, "Measurements and simulations of microtubule growth imply strong longitudinal interactions and reveal a role for GDP on the elongating end".
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R code for subsample correlation analysis as used in Thody et al. 2022.
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Kaitlin Trenfield / VMFMixture
BSD 2-Clause "Simplified" LicenseUpdated -
Jefferson Chen / Tangram
BSD 3-Clause "New" or "Revised" LicenseUpdated -
An example workflow package for the BioHPC Astrocyte workflow engine.
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An example workflow package for the BioHPC Astrocyte workflow engine.
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Astrocyte / Workflows / ENCODE / atac-seq_runner
MIT LicenseUpdated -
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Source codes to perform simulations of microtubule growth. McCormick and Cleary et al. 2023 (in preparation), "Interface-acting nucleotide controls polymerization dynamics at microtubule plus- and minus-ends".
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Gearification of Sybil Lung Cancer Risk Prediction (https://github.com/reginabarzilaygroup/Sybil)
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Move Flywheel data to box.com
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BioHPC / pyslurm
GNU General Public License v2.0 or laterPySlurm with fixes on the 16.05.5 branch to allow use with Python 3.6+
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Nihal Temamogullari / Tu_2019_image_processing
GNU General Public License v3.0 onlyUpdated -
BICF / Astrocyte / sra_pipeline
MIT LicenseUpdated