Explore projects

The flash-community FTP project allows users to share their files with guests.

tes

A vagrant box containing the setup necessary for building singularity images

Know-how, trouble-shooting, work log, and memo, etc.

This is a set of python and R routines for converting imaging and mask information to radiomic features and perform simple classification task.

This repo is designed to provide a set of scripts that models microbial communities using generalized Lotka-Volterra equations.

Simple Gears to help you start your own development at UT Southwestern

Source codes to perform simulations of microtubule growth. Cleary et al. 2022, Elife, "Measurements and simulations of microtubule growth imply strong longitudinal interactions and reveal a role for GDP on the elongating end".

Example static site using mkdocs for BioHPC GitLab pages.

Scan Singularity container images using a Clair server

Functional Mapping and Analysis Pipeline for metagenomics and metatranscriptomics studies

BioHPC Singularity tree with non-core patches

R code for subsample correlation analysis as used in Thody et al. 2022.