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An example workflow package for the BioHPC Astrocyte workflow engine.

A general purpose Astrocyte workflow to run quality control on single cell RNA sequencing data.

Ember.js sbatch script generator. Front-end only.

basic useful copy-and-paste type codes

misc code specific for placenta study

Source codes to perform simulations of microtubule growth. Cleary et al. 2022, Elife, "Measurements and simulations of microtubule growth imply strong longitudinal interactions and reveal a role for GDP on the elongating end".

R code for subsample correlation analysis as used in Thody et al. 2022.

Notebooks and scripts provided here can be used for analyzing data files generated by Tecan and Biotek plate readers.

Prototype of a web page that can search through a list of genes from user input and return the associated symbols.

Can search by synonyms and symbols.

Instructions to login into BioHPC and adding SSH key to GitHub profile