Explore projects

Multiple Fisher's exact tests for differential alternative splicing detection using RNA-seq data

code for interchangeability by Nancy Obuchowski

Analysis scripts for projects related to germ cell tumors.

This project is the astrocyte project to do variant analysis with BAMs generated in the RNASeq Differential expression analysis pipeline.

An example of ATAC-seq using BioHPC Astrocyte workflow engine.

This is a set of python and R routines for converting imaging and mask information to radiomic features and perform simple classification task.

This is the conversion of the BICF RNASeq pipeline into the nextflow framework.

An example workflow package for the BioHPC Astrocyte workflow engine.

This is the code repository for the manuscript "Characterization of Demographical Histologic Diversity in Small Renal Masses with the Clear Cell Likelihood Score"

additional steps are necessary to build HON within UTSW due to proxy and firewalls

Tools for processing droplet microfluidics data in R.

Phillips replacement