GitLab

A host registry for various images used in Astrocyte

Simple Gears to help you start your own development at UT Southwestern

Generate flow-rate gradients with Fluigent microfluidic pumps.

A Flywheel gear to import MEG metadata from files

A single-cell RNA-seq analysis workflow for data stored on the BioHPC using CellRanger and Seurat.

This is a set of python and R routines for converting imaging and mask information to radiomic features and perform simple classification task.

Three variants of regression models based on deep neural networks, random forest, and gradient boosting to predict chromatin interaction strength.

This repository contains scripts for ChIP-seq and RNA-seq analysis used in ARF paper

additional steps are necessary to build HON within UTSW due to proxy and firewalls

3 month training notes/walkthrough of excersises

R code for subsample correlation analysis as used in Thody et al. 2022.

Analysis scripts for projects related to germ cell tumors.

cutandrun pipeline from https://github.com/nf-core/cutandrun

This is the code repository for the manuscript "Characterization of Demographical Histologic Diversity in Small Renal Masses with the Clear Cell Likelihood Score"