GitLab

R code for subsample correlation analysis as used in Thody et al. 2022.

3 month training notes/walkthrough of excersises

Analysis scripts for projects related to germ cell tumors.

This is the code repository for the manuscript "Characterization of Demographical Histologic Diversity in Small Renal Masses with the Clear Cell Likelihood Score"

This is the code repository for the manuscript "Characterization of Demographical Histologic Diversity in Small Renal Masses with the Clear Cell Likelihood Score"

The runner for cutandrun

cutandrun pipeline from https://github.com/nf-core/cutandrun

additional steps are necessary to build HON within UTSW due to proxy and firewalls

basic useful copy-and-paste type codes

Three variants of regression models based on deep neural networks, random forest, and gradient boosting to predict chromatin interaction strength.