GitLab

Transcript Analyzer is a module that aids in looking at and identifying target phrases in transcripts. There are two main files ProbTimeSeries.py and TranscriptAnalyzer.py the latter of which uses Streamlit to create an app

Files from the Advanced Concepts of Deep Learning Nanocourse

This is a test repo

misc code specific for placenta study

Journal Club for foundational machine learning topics

code for interchangeability by Nancy Obuchowski

Notebooks and scripts provided here can be used for analyzing data files generated by Tecan and Biotek plate readers.

Source codes to perform simulations of microtubule growth. McCormick and Cleary et al. 2023 (in preparation), "Interface-acting nucleotide controls polymerization dynamics at microtubule plus- and minus-ends".

Simple Gears to help you start your own development at UT Southwestern

Generate flow-rate gradients with Fluigent microfluidic pumps.

A Flywheel gear to import MEG metadata from files

This repository contains scripts for ChIP-seq and RNA-seq analysis used in ARF paper

R code for subsample correlation analysis as used in Thody et al. 2022.

3 month training notes/walkthrough of excersises

Analysis scripts for projects related to germ cell tumors.

This is the code repository for the manuscript "Characterization of Demographical Histologic Diversity in Small Renal Masses with the Clear Cell Likelihood Score"