Explore BioHPC Git
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cox regression
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Know-how, trouble-shooting, work log, and memo, etc.
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This is a set of python and R routines for converting imaging and mask information to radiomic features and perform simple classification task.
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This repo is designed to provide a set of scripts that models microbial communities using generalized Lotka-Volterra equations.
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The flash-community FTP project allows users to share their files with guests.
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Implementations of the Kalata filters described in D.S. O'Kelly, Y. Guo, R.P. Mason. Evaluating online filtering algorithms to enhance dynamic multispectral optoacoustic tomography, Photoacoustics (2020)
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Parameter exploration job runner for the BioHPC nucleus cluster.
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Low-frequency small variants and large deletions detection from mitochondrial DNA deep sequencing experiments.