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Resolve "process_qc" 6 of 8 checklist items completed
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Track.pipeline 0 of 8 checklist items completed
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Resolve "Move inference to start of pipeline" 5 of 6 checklist items completed
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Resolve "Chunk bam for parallel tin calculation" 4 of 8 checklist items completed
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Resolve "process_RSeQC" 4 of 4 checklist items completed
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Resolve "process_count" 4 of 4 checklist items completed
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Resolve "Update design docs" 5 of 5 checklist items completed
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Resolve "process_makeBigWig" 3 of 3 checklist items completed
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Resolve "process_fastqc" 3 of 3 checklist items completed
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Resolve "process_dedup" 3 of 3 checklist items completed
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Resolve "process_getRef" 3 of 3 checklist items completed
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Resolve "process_align" 0 of 4 checklist items completed
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Resolve "process_createManifest" 3 of 3 checklist items completed
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Resolve "Make scripts input files for processes" 0 of 7 checklist items completed!12 v0.0.1
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Update nextflow configs to include aws 1 of 7 checklist items completed!9 v0.0.1
