Resolve "process_makeBigWig" (!19) · Merge requests · GUDMAP_RBK / RNA-seq · GitLab

Snippets Groups Projects

Merged Resolve "process_makeBigWig"

8-makeBigWig into develop

1 unresolved thread

Merged Jonathan Gesell requested to merge 8-makeBigWig into develop 5 years ago

1 unresolved thread

Please fill in the appropriate checklist below (delete whatever is not relevant). These are the most common things requested on pull requests (PRs).

PR checklist

This comment contains a description of changes (with reason)
If you've fixed a bug or added code that should be tested, add tests!

Close issue
Closes #8 (closed)

##Comment: Added step to create deduped BAI file, and passed on to BigWigs, which generates a .bw file.

/cc @ghenry @venkat.malladi

Edited 5 years ago by Gervaise Henry

Activity

Jonathan Gesell changed milestone to %v0.0.1 5 years ago

changed milestone to %v0.0.1
Jonathan Gesell added Doing ~311 labels 5 years ago

added Doing ~311 labels
Venkat Malladi marked as a Work In Progress 5 years ago

marked as a Work In Progress
Venkat Malladi changed the description 5 years ago

changed the description
Gervaise Henry unmarked as a Work In Progress 5 years ago

unmarked as a Work In Progress

Gervaise Henry @ghenry started a thread on an old version of the diff 5 years ago

Last updated 5 years ago by Jonathan Gesell

16	16	executor = 'local'
17	17	}
18	18	withName:trimData {
19		queue = 'super'
Gervaise Henry @ghenry · 5 years ago Owner use super for trimData Jonathan Gesell changed this line in version 2 of the diff 5 years ago changed this line in version 2 of the diff Please register or sign in to reply

Jonathan Gesell added 1 commit 5 years ago
added 1 commit

c1d6c6f6 - Updated queues for some processes based on observed resource usage.

Compare with previous version
Gervaise Henry enabled an automatic merge when the pipeline for c1d6c6f6 succeeds 5 years ago

enabled an automatic merge when the pipeline for c1d6c6f6 succeeds
Jonathan Gesell added 1 commit 5 years ago
added 1 commit

d3b492b6 - Update .gitlab-ci.yml

Compare with previous version
Venkat Malladi added 1 commit 5 years ago
added 1 commit

f06c5eee - Test 0.31.0

Compare with previous version
Venkat Malladi added 1 commit 5 years ago
added 1 commit

125dcf07 - Set minimum nextflow version

Compare with previous version
Venkat Malladi added 1 commit 5 years ago
added 1 commit

2fcbbf7b - Remove tower

Compare with previous version
Gervaise Henry added 1 commit 5 years ago
added 1 commit

e2a27abe - Revert "Updated queues for some processes based on observed resource usage."

Compare with previous version
Gervaise Henry enabled an automatic merge when the pipeline for c1d6c6f6 succeeds 5 years ago

enabled an automatic merge when the pipeline for c1d6c6f6 succeeds
Gervaise Henry mentioned in commit 00144f10 5 years ago

mentioned in commit 00144f10
Gervaise Henry merged 5 years ago

merged

Please register or sign in to reply