Resolve "Move inference to start of pipeline"
Please fill in the appropriate checklist below (delete those which are not relevant). These are the most common things requested on pull requests.
- This comment contains a description of changes (with reason)
- If you've fixed a bug or added code that should be tested, add tests!
- Replace dag.png with the most recent CI pipleine integrated_pe artifact
Closes #47 (closed)
Moves metadata (species, endness, spike, stranded) to the start of the pipeline and does not use any user entered metadata for any downstream processes