Resolve "Move inference to start of pipeline" (!28) · Merge requests · GUDMAP_RBK / RNA-seq

Merged Resolve "Move inference to start of pipeline"

47-move.inference into develop

Merged Gervaise Henry requested to merge 47-move.inference into develop 4 years ago

Apr 24, 2020
- Resove merge comments from @venkat.malladi · 69d74285
  Gervaise Henry authored 4 years ago
  
  69d74285
Apr 22, 2020
- Update README.md · 126fe448
  Gervaise Henry authored 4 years ago
  
  126fe448
- Remove processes from AWS configs · 170b0706
  Gervaise Henry authored 4 years ago
  
  170b0706
- Update dag · 020d5078
  Gervaise Henry authored 4 years ago
  
  020d5078
- Fix dataQC pytest · 4632cfb9
  Gervaise Henry authored 4 years ago
  
  4632cfb9
- Add && to multiline inferMetadata unit ci · 99632fd2
  Gervaise Henry authored 4 years ago
  
  99632fd2
- Move parseMetadata unit ci if statements to single line · e7937756
  Gervaise Henry authored 4 years ago
  
  e7937756
- Fix inferMetadata unit · 1310010d
  Gervaise Henry authored 4 years ago
  
  1310010d
- Fix ci yml syntax · 4aa0f8d6
  Gervaise Henry authored 4 years ago
  
  4aa0f8d6
- Add unit CI test for (new) inferMetadata · c17b8a62
  Gervaise Henry authored 4 years ago
  
  c17b8a62
- Fix align unit summary output · 488fff57
  Gervaise Henry authored 4 years ago
  
  488fff57
- Change parseMetadata CI unit test to match new mechanism · c53ffd6c
  Gervaise Henry authored 4 years ago
  
  c53ffd6c
- Add inference and apply new naming standards · 53c34278
  Gervaise Henry authored 4 years ago
  
  53c34278
Apr 07, 2020
- Reorder processes · 1d48e1ef
  Gervaise Henry authored 4 years ago
  
  1d48e1ef
- Merge develop into branch · 7ec6bd65
  Gervaise Henry authored 4 years ago
  
  7ec6bd65
- Add align sampled data · 2b89cc74
  Gervaise Henry authored 4 years ago
  
  2b89cc74
Mar 24, 2020
- Add unlimit -a to ci integration tests · 0f30eb62
  Gervaise Henry authored 4 years ago
  
  0f30eb62
- Add getRefInfer · 5ee1ac2c
  Gervaise Henry authored 4 years ago
  
  5ee1ac2c
- Change unit test for downsampleData singularity to exec · 48c69997
  Gervaise Henry authored 4 years ago
  
  48c69997
- Add unit test for downsampleData · 8e3cf6c4
  Gervaise Henry authored 4 years ago
  
  8e3cf6c4
- Add dowsampling trimmed fastqs · 3b4d0255
  Gervaise Henry authored 4 years ago
  
  3b4d0255

Resolve "Move inference to start of pipeline"

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Resolve "Move inference to start of pipeline"

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