Commits · fbd2da78f697d4c0d59c2f9e92fd307e309fa0e6 · GUDMAP_RBK / RNA-seq

Jan 19, 2020
- Fix len fastqs · fbd2da78
  Gervaise Henry authored 5 years ago
  
  fbd2da78
- Fix undetected meta endness · 29f36785
  Gervaise Henry authored 5 years ago
  
  29f36785
- Add manual detection of endness if not stored · 0acf38a4
  Gervaise Henry authored 5 years ago
  
  0acf38a4
Jan 18, 2020
- Parse metadata · e32cb502
  Gervaise Henry authored 5 years ago
  
  e32cb502
- Add checks for meta repRID · 710a67d9
  Gervaise Henry authored 5 years ago
  
  710a67d9
- Make bdbag scripts an input · 43935dd7
  Gervaise Henry authored 5 years ago
  
  43935dd7
- Initial code · 2be5d85a
  Gervaise Henry authored 5 years ago
  
  2be5d85a
Jan 14, 2020
- Rename fetched fastqs and fix se/pe · bbcfbd9f
  Gervaise Henry authored 5 years ago
  
  bbcfbd9f
Jan 13, 2020
- Cleanup .nf · d6cee4a5
  Gervaise Henry authored 5 years ago
  
  d6cee4a5
- Add getData deriva-download of bagit · e552d2e6
  Gervaise Henry authored 5 years ago
  
  e552d2e6
Nov 15, 2019
- Generalize file param input for python scripts · 0bd693e4
  Gervaise Henry authored 5 years ago
  
  0bd693e4
Oct 30, 2019
- Updated for concise output files · c2b05eaa
  Jonathan Gesell authored 5 years ago
  
  c2b05eaa
Oct 28, 2019
- Add file rename in fetch.txt to modifyFetch.py · 92f9b500
  Gervaise Henry authored 5 years ago
  
  92f9b500
- Temporary fix for file naming · b89416b5
  Jonathan Gesell authored 5 years ago
  
  b89416b5
Oct 16, 2019
- Add new process to split bdbag by replicates for parallel getData · 347d8e1a
  Gervaise Henry authored 5 years ago
  
  347d8e1a
Oct 11, 2019
- Working version of getData process · ed35a88e
  Gervaise Henry authored 5 years ago
  
  ed35a88e
Oct 08, 2019
- getData setup · e8e5d140
  Gervaise Henry authored 5 years ago
  
  e8e5d140
Sep 12, 2019
- Initial commit with blank repository files · 94bd37e5
  Gervaise Henry authored 5 years ago
  
  94bd37e5