Commits · b4be19267539202f81f672ecf1bb2c0f2f0d953d · GUDMAP_RBK / RNA-seq

Nov 14, 2019
- Merge branch '3-trimming' into 'develop' · b4be1926
  Gervaise Henry authored 5 years ago
```
Added trimming step using trimGalore and logging.

Closes #3

See merge request !3
```
  b4be1926
Nov 11, 2019
- Update biohpc.config to use new docker repo name. · b00a62fe
  Jonathan Gesell authored 5 years ago
  
  b00a62fe
- Added trimming step using trimGalore and logging. · 3d8cc5f7
  Jonathan Gesell authored 5 years ago
  
  3d8cc5f7
Nov 08, 2019
- Update LICENSE · f6b9f1f2
  Gervaise Henry authored 5 years ago
  
  f6b9f1f2
- Update Merge_Request.md · 9b90db6e
  Gervaise Henry authored 5 years ago
  
  9b90db6e
- Update merge request template · 38ec0ce0
  Gervaise Henry authored 5 years ago
  
  38ec0ce0
- Update biohpc.config · 16e91612
  Jonathan Gesell authored 5 years ago
  
  16e91612
- Add Merge request template · 9ed6b3fd
  Venkat Malladi authored 5 years ago
  
  9ed6b3fd
Nov 06, 2019
- Merge branch 'develop' of https://git.biohpc.swmed.edu/gudmap_rbk/rna-seq into develop · 049251b2
  Gervaise Henry authored 5 years ago
  
  049251b2
Nov 04, 2019
- Update README.md · 4c2d64a4
  Gervaise Henry authored 5 years ago
  
  4c2d64a4
- Resolve merge conflict with pipeline diagram · b29bf6fd
  Gervaise Henry authored 5 years ago
  
  b29bf6fd
- Add template for bug issue · c8794f5d
  Gervaise Henry authored 5 years ago
  
  c8794f5d
Oct 31, 2019
- Add GUDMAP-RBK logo to docs · f105a913
  Gervaise Henry authored 5 years ago
  
  f105a913
- Update pipeline diagram removing aggr · c1fc910d
  Gervaise Henry authored 5 years ago
  
  c1fc910d
- Add GUDMAP-RBK log to docs · 2a6c7aaf
  Gervaise Henry authored 5 years ago
  
  2a6c7aaf
Oct 30, 2019
- Updated for concise output files · c2b05eaa
  Jonathan Gesell authored 5 years ago
  
  c2b05eaa
Oct 29, 2019
- Add back working deriva cookie copy (link) · 9c845c6e
  Gervaise Henry authored 5 years ago
  
  9c845c6e
Oct 28, 2019
- Update pipeline diagram removing aggr · 40a754cf
  Gervaise Henry authored 5 years ago
  
  40a754cf
- Update README.md · 86955c45
  Gervaise Henry authored 5 years ago
  
  86955c45
- Add file rename in fetch.txt to modifyFetch.py · 92f9b500
  Gervaise Henry authored 5 years ago
  
  92f9b500
- Temporary fix for file naming · b89416b5
  Jonathan Gesell authored 5 years ago
  
  b89416b5
Oct 23, 2019
- Merge branch 'master' of git.biohpc.swmed.edu:gudmap_rbk/rna-seq into 1-process_getData · 813bcb28
  Jonathan Gesell authored 5 years ago
  
  813bcb28
Oct 16, 2019
- Update README.md · 16d22423
  Gervaise Henry authored 5 years ago
  
  16d22423
- Add new process to split bdbag by replicates for parallel getData · 347d8e1a
  Gervaise Henry authored 5 years ago
  
  347d8e1a
- Delete CONTRIBUTING.md · a0c758ed
  Gervaise Henry authored 5 years ago
  
  a0c758ed
- Update README.md · 0e16bd4e
  Gervaise Henry authored 5 years ago
  
  0e16bd4e
- Update CONTRIBUTING.md · 700d6bf9
  Gervaise Henry authored 5 years ago
  
  700d6bf9
- Add CONTRIBUTING · 42a01844
  Gervaise Henry authored 5 years ago
  
  42a01844
Oct 15, 2019
- Corrected Singularity CacheDir · 2b4b2e9b
  Jonathan Gesell authored 5 years ago
  
  2b4b2e9b
- Added container functionality · c54a846c
  Jonathan Gesell authored 5 years ago
  
  c54a846c
Oct 11, 2019
- Merge branch '1-process_getData' into 'develop' · 4442b00e
  Gervaise Henry authored 5 years ago
```
Resolve "process_getData"

See merge request !1
```
  4442b00e
- Working version of getData process · ed35a88e
  Gervaise Henry authored 5 years ago
  
  ed35a88e
Oct 08, 2019
- getData setup · e8e5d140
  Gervaise Henry authored 5 years ago
  
  e8e5d140
Sep 12, 2019
- Add draft of pipeline schematic · 4f3e4066
  Gervaise Henry authored 5 years ago
  
  4f3e4066
- Initial commit with blank repository files · 94bd37e5
  Gervaise Henry authored 5 years ago
  
  94bd37e5