Commits · 28d04e1648bec41c4bcffd4383d216f781af0347 · GUDMAP_RBK / RNA-seq

Jul 25, 2021
- Remove all tracking with AWS resources · daea36d6
  Gervaise Henry authored 3 years ago
  
  daea36d6
- Revert to NF 20.01.0 for ci · 5c4a68d9
  Gervaise Henry authored 3 years ago
  
  5c4a68d9
- Update ci to use nf 21.02.0 · dbb1a01d
  Gervaise Henry authored 3 years ago
  
  dbb1a01d
- Update ci to use nf 21 · 6ad35821
  Gervaise Henry authored 3 years ago
  
  6ad35821
- Change seqwho ref location in ci · e6fda180
  Gervaise Henry authored 3 years ago
  
  e6fda180
Jul 21, 2021
- Remove fail integration CI tests · bc8e1a9e
  Gervaise Henry authored 3 years ago
  
  bc8e1a9e
- Use CI variables for getBag CI · 0d23777e
  Gervaise Henry authored 3 years ago
  
  0d23777e
- Fix -u in uploadOutputBag CI · c1c185da
  Gervaise Henry authored 3 years ago
  
  c1c185da
- Temporarily add -u to uploadOutputBag CI · eb32e8de
  Gervaise Henry authored 3 years ago
  
  eb32e8de
- Use CI variables for uploadOutputBag CI · ed7637aa
  Gervaise Henry authored 3 years ago
  
  ed7637aa
- Fix uploadProcessedFiles CI exists · 933fe186
  Gervaise Henry authored 3 years ago
  
  933fe186
- Use CI variables for uploadProcessedFiles CI · 3e0130a4
  Gervaise Henry authored 3 years ago
  
  3e0130a4
- Fix uploadExecutionRun and uploadQC CI exist · 984d0810
  Gervaise Henry authored 3 years ago
  
  984d0810
- Use CI variables for uploadQC CI · d0448f31
  Gervaise Henry authored 3 years ago
  
  d0448f31
- Use CI variables for uploadExecutionRun CI · 1f06bc2b
  Gervaise Henry authored 3 years ago
  
  1f06bc2b
- Remove CI proxy export · 10655e42
  Gervaise Henry authored 3 years ago
  
  10655e42
- Add UTSW proxy into ci before · 4b8e4d03
  Gervaise Henry authored 3 years ago
  
  4b8e4d03
Apr 12, 2021
- Update aws resources · f9e50ab2
  Gervaise Henry authored 3 years ago
  
  f9e50ab2
- Change aws queue to priority · f61893a7
  Gervaise Henry authored 3 years ago
  
  f61893a7
- Remove version from aws job · 90560c1c
  Gervaise Henry authored 3 years ago
  
  90560c1c
- Add version to aws job definition · 68876b78
  Gervaise Henry authored 3 years ago
  
  68876b78
- Fix aws status check conditional · 4d0954c1
  Gervaise Henry authored 3 years ago
  
  4d0954c1
- Fix aws status check conditional · 87097361
  Gervaise Henry authored 3 years ago
  
  87097361
- Shorten aws status check · ff3c5146
  Gervaise Henry authored 3 years ago
  
  ff3c5146
Mar 21, 2021
- Hardwire pipeline version for env tests · aa0103d0
  Gervaise Henry authored 4 years ago
  
  aa0103d0
- Split aws exports · 56f97599
  Gervaise Henry authored 4 years ago
  
  56f97599
- Put aws ci exports on same line · 7c31f438
  Gervaise Henry authored 4 years ago
  
  7c31f438
- Use base singularity for env latest get · 00eb7f47
  Gervaise Henry authored 4 years ago
  
  00eb7f47
Mar 20, 2021
- Finalize pre release · 50b56cab
  Gervaise Henry authored 4 years ago
  
  50b56cab
Mar 19, 2021
- Add back consistent test · 4bf36dab
  Gervaise Henry authored 4 years ago
  
  4bf36dab
- Fix aws batch submit json localtion · 3b4e91d2
  Gervaise Henry authored 4 years ago
  
  3b4e91d2
- Finalize aws env ci + docs · 09bd8e2b
  Gervaise Henry authored 4 years ago
  
  09bd8e2b
- Trim whitespace from aws status · 7d1ab439
  Gervaise Henry authored 4 years ago
  
  7d1ab439
- Temp remove aws check for failed · a6529852
  Gervaise Henry authored 4 years ago
  
  a6529852
- Try to fix the aws succeeded test · 0432c2a7
  Gervaise Henry authored 4 years ago
  
  0432c2a7
Mar 18, 2021
- Change aws status check sleep to 5 mins · f9e5dfd2
  Gervaise Henry authored 4 years ago
  
  f9e5dfd2
- Re-split exports · 738130f8
  Gervaise Henry authored 4 years ago
  
  738130f8
- Try to fix batch submit command · 145b5e6c
  Gervaise Henry authored 4 years ago
  
  145b5e6c
- Downgrade aws cli in ci · 95e76ad2
  Gervaise Henry authored 4 years ago
  
  95e76ad2
- Split aws env ci steps · 9c6cd2bf
  Gervaise Henry authored 4 years ago
  
  9c6cd2bf