Add unexpected meta and fastq structure error ci integration tests

.gitlab-ci.yml

@@ -749,6 +749,36 @@ failMismatchR1R2:
     when:
       - always
 
+failUnexpectedMeta:
+  stage: integration
+  only: [merge_requests]
+  except:
+    variables:
+        - $CI_MERGE_REQUEST_TARGET_BRANCH_NAME =~ /master/
+  script:
+  - hostname
+  - ulimit -a
+  - nextflow -q run ./workflow/rna-seq.nf --deriva ./test_data/auth/credential.json --bdbag ./test_data/auth/cookies.txt --repRID 14-3R4R --source staging --upload true -with-dag dag.png --dev false --ci true
+  retry:
+    max: 0
+    when:
+      - always
+
+failFileStructure:
+  stage: integration
+  only: [merge_requests]
+  except:
+    variables:
+        - $CI_MERGE_REQUEST_TARGET_BRANCH_NAME =~ /master/
+  script:
+  - hostname
+  - ulimit -a
+  - nextflow -q run ./workflow/rna-seq.nf --deriva ./test_data/auth/credential.json --bdbag ./test_data/auth/cookies.txt --repRID Q-Y5HT --source staging --upload true -with-dag dag.png --dev false --ci true
+  retry:
+    max: 0
+    when:
+      - always
+
 override_inputBag:
   stage: integration
   only: [merge_requests]