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Commit 957b7679 authored by Gervaise Henry's avatar Gervaise Henry :cowboy:
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Fix no fastq error detail

parent f453a4e3
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2 merge requests!65Develop,!64Resolve "samtools sort: couldn't allocate memory for bam_mem"
Pipeline #9053 failed with stages
in 19 minutes and 44 seconds
......@@ -386,7 +386,7 @@ process parseMetadata {
elif [ "${fastqCount}" -eq "0" ]
then
fastqCountError=true
fastqCountError_details="**No valid fastqs detected (may not match .R{1,2}.fastq.gz convention)**"
fastqCountError_details="**No valid fastqs detected (may not match .R{12}.fastq.gz convention)**"
elif [ "\${endsMeta}" == "se" ] && [ "${fastqCount}" -ne "1" ]
then
fastqCountError=true
......
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