Skip to content
Snippets Groups Projects
Commit 7e5aaebf authored by Gervaise Henry's avatar Gervaise Henry :cowboy:
Browse files

Fix some bad variables

parent bd29b16e
Branches
Tags
2 merge requests!58Develop,!56Resolve "Detect error in inferMetadata for tracking"
Pipeline #8830 failed with stages
in 2 minutes and 47 seconds
Hide whitespace changes
Inline Side-by-side
Showing
with 3 additions and 2 deletions
workflow/rna-seq.nf
+ 3
− 2
View file @ 7e5aaebf
...@@ -1119,6 +1119,7 @@ inputBagRID_fl.splitCsv(sep: ",", header: false).separate( ...@@ -1119,6 +1119,7 @@ inputBagRID_fl.splitCsv(sep: ",", header: false).separate(
inputBagRID.into { inputBagRID.into {
inputBagRID_uploadExecutionRun inputBagRID_uploadExecutionRun
inputBagRID_finalizeExecutionRun inputBagRID_finalizeExecutionRun
inputBagRID_failPreExecutionRun
inputBagRID_failExecutionRun inputBagRID_failExecutionRun
} }
...@@ -2064,8 +2065,8 @@ process failPreExecutionRun { ...@@ -2064,8 +2065,8 @@ process failPreExecutionRun {
path credential, stageAs: "credential.json" from deriva_failPreExecutionRun path credential, stageAs: "credential.json" from deriva_failPreExecutionRun
val spike from spikeMeta_failPreExecutionRun val spike from spikeMeta_failPreExecutionRun
val species from speciesMeta_failPreExecutionRun val species from speciesMeta_failPreExecutionRun
val inputBagRID from inputBagRID_failExecutionRun val inputBagRID from inputBagRID_failPreExecutionRun
val fastqCountError from fastqCountError_failExecutionRun val fastqCountError from fastqCountError_failPreExecutionRun
val fastqCountError_details val fastqCountError_details
val fastqReadError from fastqReadError_failPreExecutionRun val fastqReadError from fastqReadError_failPreExecutionRun
val fastqReadError_details val fastqReadError_details
......
0% or .
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment