Skip to content
GitLab
Explore
Sign in
Primary navigation
Search or go to…
Project
RNA-seq
Manage
Activity
Members
Labels
Plan
Issues
12
Issue boards
Milestones
Iterations
Wiki
Requirements
Code
Merge requests
0
Repository
Branches
Commits
Tags
Repository graph
Compare revisions
Snippets
Locked files
Build
Pipelines
Jobs
Pipeline schedules
Test cases
Artifacts
Deploy
Releases
Container Registry
Operate
Environments
Monitor
Incidents
Service Desk
Analyze
Value stream analytics
Contributor analytics
CI/CD analytics
Repository analytics
Code review analytics
Issue analytics
Insights
Model experiments
Help
Help
Support
GitLab documentation
Compare GitLab plans
Community forum
Contribute to GitLab
Provide feedback
Keyboard shortcuts
?
Snippets
Groups
Projects
GUDMAP_RBK
RNA-seq
Commits
7e5aaebf
Commit
7e5aaebf
authored
4 years ago
by
Gervaise Henry
Browse files
Options
Downloads
Patches
Plain Diff
Fix some bad variables
parent
bd29b16e
Branches
Branches containing commit
Tags
Tags containing commit
2 merge requests
!58
Develop
,
!56
Resolve "Detect error in inferMetadata for tracking"
Pipeline
#8830
failed with stages
in 2 minutes and 47 seconds
Changes
1
Pipelines
1
Hide whitespace changes
Inline
Side-by-side
Showing
1 changed file
workflow/rna-seq.nf
+3
-2
3 additions, 2 deletions
workflow/rna-seq.nf
with
3 additions
and
2 deletions
workflow/rna-seq.nf
+
3
−
2
View file @
7e5aaebf
...
...
@@ -1119,6 +1119,7 @@ inputBagRID_fl.splitCsv(sep: ",", header: false).separate(
inputBagRID.into {
inputBagRID_uploadExecutionRun
inputBagRID_finalizeExecutionRun
inputBagRID_failPreExecutionRun
inputBagRID_failExecutionRun
}
...
...
@@ -2064,8 +2065,8 @@ process failPreExecutionRun {
path credential, stageAs: "credential.json" from deriva_failPreExecutionRun
val spike from spikeMeta_failPreExecutionRun
val species from speciesMeta_failPreExecutionRun
val inputBagRID from inputBagRID_failExecutionRun
val fastqCountError from fastqCountError_failExecutionRun
val inputBagRID from inputBagRID_fail
Pre
ExecutionRun
val fastqCountError from fastqCountError_fail
Pre
ExecutionRun
val fastqCountError_details
val fastqReadError from fastqReadError_failPreExecutionRun
val fastqReadError_details
...
...
This diff is collapsed.
Click to expand it.
Preview
0%
Try again
or
attach a new file
.
Cancel
You are about to add
0
people
to the discussion. Proceed with caution.
Finish editing this message first!
Save comment
Cancel
Please
register
or
sign in
to comment