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Prototype of a web page that can search through a list of genes from user input and return the associated symbols.
Can search by synonyms and symbols.
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Instructions to login into BioHPC and adding SSH key to GitHub profile
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Contains various scripts used for all data analysis in Bacon_et_al_Mol_Cell_2020.
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Course material for machine learning course offered to UTSW community.
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Multiple Fisher's exact tests for differential alternative splicing detection using RNA-seq data
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BICF / Astrocyte / cellranger_count
MIT LicenseUpdated -
A list of R packages/libraries required to run pipelines.
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Strand Lab / sc-TissueMapper
MIT LicenseUpdated -
BioHPC / pyslurm
GNU General Public License v2.0 or laterPySlurm with fixes on the 16.05.5 branch to allow use with Python 3.6+
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Nihal Temamogullari / Tu_2019_image_processing
GNU General Public License v3.0 onlyUpdated -
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Holly Ruess / celseq2
BSD 3-Clause "New" or "Revised" LicenseUpdated -
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BICF / Software / TReNCo
MIT LicenseTAD aware Regulatory Network Construction (TReNCo). The package provides scripts for constructing cell-type specific mouse TF-gene networks.
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Vishruth Mullapudi / abundanceparser
MIT LicenseUpdated