GitLab

Source codes to perform simulations of microtubule growth. Cleary et al. 2022, Elife, "Measurements and simulations of microtubule growth imply strong longitudinal interactions and reveal a role for GDP on the elongating end".

TAD aware Regulatory Network Construction (TReNCo). The package provides scripts for constructing cell-type specific mouse TF-gene networks.

Testing for data normality and variability, reporting sample sizes, and visualizing data groups.

Low-frequency small variants and large deletions detection from mitochondrial DNA deep sequencing experiments.

PySlurm with fixes on the 16.05.5 branch to allow use with Python 3.6+

tes

This is a project to show an example CI pipeline.

Know-how, trouble-shooting, work log, and memo, etc.

A vagrant box containing the setup necessary for building singularity images

Data analysis pipeline for preprocessing and reconstruction of data acquired on the iThera MSOT InVision 256-TF imaging device.