Explore projects

This project is the astrocyte project to do variant analysis with BAMs generated in the RNASeq Differential expression analysis pipeline.

An example workflow package for the BioHPC Astrocyte workflow engine.

An example workflow package for the BioHPC Astrocyte workflow engine.

This is the conversion of the BICF RNASeq pipeline into the nextflow framework.

additional steps are necessary to build HON within UTSW due to proxy and firewalls

The general gene expression analysis pipeline of 10X Visium data

A repository for code to replicate the analysis of single cell data from female human urethra.

code for interchangeability by Nancy Obuchowski

Analysis scripts for projects related to germ cell tumors.

This is the code repository for the manuscript "Characterization of Demographical Histologic Diversity in Small Renal Masses with the Clear Cell Likelihood Score"